<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13452
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MTEDWQSQKFRQNVISKIHDLLPANAQDQSKNAGVMENHIFRKSRSKDEYLGLVAKLFMHYKDMSRKSQQQQQQQQQQQQQGGPPPNAEMGGGQNMMQDPLNALQNLASQGNRNPQMMPMGAGGAPVPGGPGTASNLLQSLNQQRPGQQQMQPMPNIRGQMPMGAGGGGAAQQMMQVQQQMQGGNAPGVMNVMGAGGGQNQGQIVGNPGQQMGVGMPNQMVGPGPNSGPAVGGAGGANAAPGSAGPGPNQMQSGPMNTMQQMPPMQQIQQNQMGMGINPMMRMGQGNGMGGPQGMPGQGMQGMPQNMQQGPHNVVGGPAGQQQVGGTGLPPNAVQQGGMNPMGGMGVNMPPNLQQKPNMPMGQGGQMFPGNRGGVGVGGQQPGQPFMRSSPSPADAQQLQQQQAQLQQMQQAQQQQQLVVGNQTPTQQPPTPQMPTPMIPSPALVPQSSPQMMQMQNPQRNIRQQSPSASINTPGQVTGNSPFNPQEEALYREKYKQLTKYIEPLKRMLAKISNDGTNVEKMTKMSKLLEILCNPTQRVPLETLLKCEKALEKMDLISYSGQQFGKSSNPLLEVINTTLQSPVANHTLHRTFRPTLELLFGTDIAAPVPAKRPRVEEKSSPFEQDVPHVLQGEIARLDSKFKVKLDTTSQINNKAIRLICCLDDKRLPSVPPVSVSVPEEYPWQAPDCSLTEQEYSATPFLQTVQQSLIARISKLPKNYSLSHLLDTWEMAVRQACSPQSKPRAVCELTTFLGV |
Length | 754 |
Position | Tail |
Organism | Drosophila ficusphila (Fruit fly) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea>
Drosophilidae> Drosophila> Sophophora.
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Aromaticity | 0.03 |
Grand average of hydropathy | -0.686 |
Instability index | 67.12 |
Isoelectric point | 9.39 |
Molecular weight | 81306.95 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP13452
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 519.48| 84| 85| 208| 291| 1
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59- 121 (67.48/ 9.78) .............................MHYKDM.SRKSQQQ..........QQQQQQQQQQG.GPP........P..NAEMGGGqNMM..QD......PLnalQNLASqGNRNpQMM.PMG
122- 224 (125.57/25.16) AGGAPVPGGPGTASNLLQSlnqQRPGQQQMQ..PMpNIRGQMPmgaggggaaqQMMQVQQ.QMQGGNA........PgvMNVMGAG.GGQ..NQgqivgnPG...QQMGV.GMPN.QMV.GPG
225- 310 (162.42/34.91) PNSGPAVGGAGGANAAPGS...AGPGPNQMQSGPM.NTMQQMP..........PMQQIQQNQMGMGIN........P..MMRMGQG.NGM..GG..pqgmPG...QGMQ..GMPQ.NM..QQG
311- 376 (94.65/16.97) PHN..VVGGPAGQQQVGGT...GLP.PNAVQQGGM.N................PM.......GGMGVNmppnlqqkP..NMPMGQG.GQM...F......PG...NRGGV.G...........
378- 443 (69.36/10.28) .................GG...QQPGQPFMRSSPS.PA...............DAQQLQQQQAQL..Q........Q..MQQAQQQ.QQLvvGN....qtPT...QQPPTpQMPT.PMIpSPA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 148.90| 48| 75| 609| 665| 2
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609- 660 (73.25/66.57) PAKRP.....RVEEKSSPFEQDVPHVLQGEIARLDSKFKVK..LDTTsQInnkAIRLIC
682- 736 (75.64/43.92) PWQAPdcsltEQEYSATPFLQTVQQSLIARISKLPKNYSLShlLDTW.EM...AVRQAC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 74.71| 15| 87| 471| 485| 5
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471- 485 (29.41/13.10) INTP.GQVTGNSPFNP
557- 570 (24.48/ 9.82) ISYS.GQQFGKSS.NP
579- 594 (20.83/ 7.40) LQSPvANHTLHRTFRP
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