<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13424

Description Putative Serine threonine-protein kinase nrc-2
SequenceMNSDDLSHSSPSSLPSPSPSPSPPAPVPAPTPPLPLPSRLPSSSPSPSPSSSSPTPSSTPSPAPRPARFSSSSFRSRPLRLRIKQRLATWHYSHPKQQQQQQQQQQQQQQQQQQQQQQQQQQQLSSIAHTSDQDSPFPDKMPSLKSPSHPGGNSHFNQKLRNFFRINTHTGVSDKERLSDSSLKPDSKAGSRQPKRFFTVGRLRSTTTASEGNPLDDVMSPTASANPYFAHQGQPGLRHHETGSVPPSPPDTPMLRIDGPGDGKEHATNATKEELARKLRRVASAPNAQGLFNQGKADGERPATAELGKEPLVQSGNAASLGLVDSKPASLADARTLSVPDGDGLGALPPPGQNNLAFRRTYSSNSIKVRTVEVGPASFDKIKLIGKGDVGKVYLVREKKSARLYAMKVLSKKEMIKRNKIKRALAEQEILATSNHPFIVTLYHSFQSEDHLYLCMEYCSGGEFFRALQTRPGKCIPEDDARFYAAEVTAALEYLHLMGFIYRDLKPENILLHQSGHIMLSDFDLSKQSGPGGKPTMIMGKNGASTSSLPTIDTKSCIANFRTNSFVGTEEYIAPEVIKGSGHTSAVDWWTLGILIFEMLYGTTPFKGKNRNTTFANILREEVTFPEHSGSPQISNLCKSLIRKLLIKDETRRLGARAGASDIKTHAFFRTTQWALIRHMKPPIVPHAGRGIDTVNFRNVKESESVDITASKTSGFVKGVPLDSGLATPGNEIADPFEEFNSVTLHHDGDDHYSDHDSMR
Length760
PositionTail
OrganismRosellinia necatrix (White root-rot fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Xylariomycetidae> Xylariales> Xylariaceae> Rosellinia.
Aromaticity0.06
Grand average of hydropathy-0.666
Instability index59.68
Isoelectric point9.42
Molecular weight83268.56
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13424
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.11|      16|      16|      91|     106|       1
---------------------------------------------------------------------------
   91-  106 (31.75/22.44)	HYSHPKQQQQQQQQQQ
  108-  123 (28.36/19.16)	QQQQQQQQQQQQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.01|      25|      27|      11|      37|       2
---------------------------------------------------------------------------
   12-   36 (50.83/17.90)	SSLPSPSPSPSPPAPVPAPTPPLPL
   57-   81 (44.18/12.83)	SSTPSPAPRPARFSSSSFRSRPLRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     199.66|      41|      88|     258|     298|       3
---------------------------------------------------------------------------
  150-  182 (42.03/18.94)	PG.GNSH..........F.....NQKLRNFFRIN....THTGV.SDKERlSD...............S..S
  185-  233 (34.96/14.56)	P.DSKAG.SR.QPKRFFT.....VGRLRSTTTAS....EGNPL........DdvmsptasanpyfahQ..G
  260-  297 (55.95/27.56)	PGDGKEH.AT.NATKEEL.....ARKLRRVASAP....NAQGL.FNQGK.A....................
  298-  344 (25.73/ 8.85)	..DGERP.ATaELGKEPLvqsgnAASLGLVDSKPaslaDARTLsVPDG...................D..G
  349-  386 (40.99/18.30)	PPPGQNNlAF.RRTYSSN.....SIKVRTVEVGP....AS....FDKIK...................liG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.82|      11|      90|      44|      54|       4
---------------------------------------------------------------------------
   44-   54 (22.93/10.01)	SPSPS..PSSSSP
  135-  147 (18.89/ 6.83)	SPFPDkmPSLKSP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13424 with Med15 domain of Kingdom Fungi
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