<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13397

Description Uncharacterized protein
SequenceMKKPSTSNEEIAKVEAETLIIEKNNVANGIVELINQHRITKLVMGMSSFSTKRKVPKSKVAAIVHQQAKPYCQIFFICKGSLGCTRDANLGCTKADSPRSSSASTLSDETEIPTRSVSLPPGHPGYRGSPDESFLPRRSHSVSYPSSGLITNVERMSPIAPQSIHVKTTYCSPNSSLPSNEGSSSSSLKDSDSLDGSPVPASIISYEEQQMSMVENGMHNEVFERLQQARTELERSRKEACEGRQKAERDLFEASMKSKARENSLHKEKKEVEEKLTKEKSILEKEKLQIYNELQKANEQRAQLENKLLQTNSLLEELQQLQGELQREKEDALREVEEMCKLYCNRNFASAGEVSLTEFSYSEIEEATNNFDGSREIGQGGCASVYRGFLRHTTVAIKKFNREGAVGEKEFNDEVEILCRMRHPNLATLIGLCRDPKVLVYEFMPNGSLEDRLQCKLHTEPLPWRMRVRIAADICTALIFLHSNKPKSIAHGDLKPDNVLLDANFVGKLGDFGISRSLDLTNTTVTPYHRTDHIKGTLGYMDPGYIASGELTAQYDVYSFGVVLLRLLTGKSPLGLQSEVEASMSSGVLHEILDASAGEWPLEHAEELARLALKCCRLNRKDRPDLAKEAWGILQAMMNEPPPSSAHPPKAEAPSYFICPMTQEIMRDPHIAADGFTYEGDAIKDWIQRGHTMSPMTYLNLSHHELIPNNALRFAIQEWQMGQQQ
Length725
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.06
Grand average of hydropathy-0.538
Instability index47.50
Isoelectric point6.02
Molecular weight81104.05
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13397
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      56.43|      16|      17|     227|     242|       1
---------------------------------------------------------------------------
  219-  236 (20.94/ 9.25)	HNEVFErlQQARTEL.ERS
  237-  255 (16.52/ 6.03)	RKEACEgrQKAERDLfEAS
  269-  286 (18.97/ 7.81)	KKEVEEklTKEKSIL.EKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     152.18|      40|      42|     383|     422|       2
---------------------------------------------------------------------------
  346-  378 (38.06/25.01)	....RNFASAGEVSLTEFSySEIEEATNNFDGSREI.............G
  383-  422 (67.12/50.24)	ASVYRGFLRHTTVAIKKFN.REGAVGEKEFNDEVEILC.........RMR
  427-  467 (47.00/32.77)	ATLI.GLCRDPKVLVYEFM.PNGSLEDR.......LQCklhteplpwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.57|      21|     273|     315|     342|       3
---------------------------------------------------------------------------
  289-  309 (34.44/24.93)	QIYNELQKANEQ..RAQLENKLL
  320-  342 (31.13/21.73)	QLQGELQREKEDalREVEEMCKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      30.73|      10|     367|     165|     181|       4
---------------------------------------------------------------------------
  144-  154 (15.21/ 6.94)	Y..PSSGLITNvE
  170-  181 (15.52/ 9.57)	YcsPNSSLPSN.E
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13397 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KTTYCSPNSSLPSNEGSSSSSLKDSDSLDGSPVPASIISYEEQQMSMVENGMHNEVFERLQQARTELERSRKEACEGRQKAERDLFEASMKSKARENSLHKEKKEVEEKLTK
2) TKADSPRSSSASTLSDETEIPTRSVSLPPGHPGYRGSPDESFLPRRSHS
167
93
278
141










Molecular Recognition Features






MoRF SequenceStartStop




NANANA