<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13393

Description Uncharacterized protein
SequenceMLNRAVVVQKELEEQERLDQEMADQHREKGNELFKQKQYHEAAIHYTRATKMNPKDPKAFSNRAQCHIYLGALPQGLEDAQKCVELDPTFLKGYVRKAKVQFLMENYENAMATYLEGLRCDPNNLEVLDGLRRCAACIKRANGGDVELKDLKEMLGDFQSENDLLKFRKATEQATILKKEASDERLKRIESERMARTMEEYLSGVQQESERLKKQHHEVMEKLLKANMDNEHLQGQLSESRGQYEQILSEHDRLLHERNHAVREVQELRQKRGQMLSVLVTAMHCEFSSSELEHATDNFSSSLKIGEGGFGCVYKGTLRNMTVAIKVLKPDGLQGQSQFEQEVAILSRVRHPHLVTLLGACSEISTLVYEFLPNGSLEDFLMCAEKRQTLSWQIRIRIISEICSALTFLHKNKPHPVVHGDLKPANILLDVNLVSKLSDFGISRHLIQSSTNNTTMYHTMHPMGTLQYMDPEFFATGELTCQSDIYSFGIVVLRLLTGKPPDGIKRIVEDAMEKGDLNSVVDTSAGEWPVVHVQQLALLALSCTELSRKSRPDLSAVVWAVVEAMKDAATIPSASSSRSVSDENSTPSYFICPISQDVMDDPHIAADGFTYEAEAIRSWLDSGHDTSPMTNMRLEHDELIPNRALRSAILEWLQQQNTAL
Length660
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.06
Grand average of hydropathy-0.442
Instability index44.18
Isoelectric point5.73
Molecular weight74696.19
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
plasma membrane	GO:0005886	IEA:UniProtKB-SubCell
plastid	GO:0009536	IEA:UniProtKB-KW
thylakoid	GO:0009579	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13393
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     195.23|      62|      92|     104|     168|       1
---------------------------------------------------------------------------
  104-  168 (101.87/72.29)	MENYENAMATYLEGLRCDPNNL.....EVLDGLRRCAACIKRANGgdvELKDLKEMLGDFQSEND.LLKFR
  191-  258 (93.36/58.57)	SERMARTMEEYLSGVQQESERLkkqhhEVMEKLLKANMDNEHLQG...QLSESRGQYEQILSEHDrLLHER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.67|      10|      28|     522|     531|       3
---------------------------------------------------------------------------
  522-  531 (20.37/11.99)	DTSAGEWPVV
  553-  562 (18.29/10.17)	DLSAVVWAVV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13393 with Med32 domain of Kingdom Viridiplantae
Unable to open file!