<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13385

Description Uncharacterized protein
SequenceMVVGEKCGGASWGSDVVLLVEATANLFPYVESIKTNYIVPTLEFFNGAPADDRDFGYDSISNCSYTLLAFTAADSAPEPACVTVTPPTSSIGKVLAAFDKLLFGGGAAEQCSHIGEALATALQVFDDLAACKGPPAKEGARHCILVCNSPPYQLPVLETVGFQGQTLQQLAATMAERAIQLSIVCPRKIPQLCKLFEKAGGDLMGTLAKNYAKDKRHLVLPSGFTLAERPVTPPPETRLAPASPRSPAPGQKRPAPPGSSPPRETKIFKQPGNVLSPVSAQGPQPVGPPVTNVQRGQTQTPPSIVPMNQPNPPNVNIRQFNADVRSPGNGRLGPGPPVGPVGPAGVGAPHWNNASPPVSTPSPSGGTANMPLLHSQLSTAPMRAQNPVQGQFQQFRPRMGGPGGQMAGSGPQGNQGSPGMGYNQQPMMNQGPPGTMIGPGPGAPGMNQNVPPNQVNPNQPPMGNLNANMMGVNQAGMPGPGPMAPSQPGPAQRRIIWRGDIEYHDRVSTPNQRVSYKLNCVIGSQVNQATKQSEVNAGTWPEKMQLQLLPRVLLMNVMPAIKNAARCVYLNFQHQAPDPSQPSNPQLSSEQALQNLCRLMSNSYLGFIHLTPPCDIKVMIVVYMPEQNTFIGLIANEQEMLLNAIKQVFENHKKAQQQQQQQQQQQQQQQQQQQQQQQQQQKNKMMMQSQQGPQGHAIPPPGGPPQGPPMANMGPQGPPMVSMAQQMGGQMGGQMGQQMGGQHDAVRPGMMQQGPPLASMAVQGQIAGQLGNPMNQQIAMGGGPHQPTHMGQRQMGIAPQGGMSNPQQQNVGMNPQGLGQSGNPMAGPMMGGPGQQMMGGNAPQGAMMGPGPTGPGGPQGQGPGGPGQSGADYAAMDERKQNLIKIQQLQQNLEAAQQKELQYKQQQQLPGQGAVAAVGGLGGMMAPQNGPRPIGPGPQMRGMAPQGPQNPQLKHLLQQQVQAQQMRLQGPQGMMQPGPQGPQNPPQMYGQQNQQYMPPGGYNQQF
Length1006
PositionUnknown
OrganismTropilaelaps mercedesae
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Chelicerata> Arachnida> Acari> Parasitiformes> Mesostigmata> Gamasina> Dermanyssoidea> Laelapidae> Tropilaelaps.
Aromaticity0.04
Grand average of hydropathy-0.588
Instability index56.86
Isoelectric point9.28
Molecular weight106453.21
Publications
PubMed=28327890

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13385
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     790.35|     119|     120|     221|     339|       4
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  221-  339 (216.15/48.69)	PSGF.TL.....AERP...............V.TPPPETRLA..P..ASPRSPA.............P........GQKRPAPPGS.......SPPRETKIFKQP.GNVLSPVSAQ...GPQP.......................V...GP...................PVTNVQR.....G.....QT...................QTP.PSI...VPMNQPNPPNVNIRQ.FNA.DVRSPG.NGRLG...P..GPPVG
  343-  478 (133.27/26.07)	PAGV.GAphwnnASPP...............VsTPSPSGGTAnmPllHSQLSTA.............PmraqnpvqGQFQQFRPRM.......GGPGGQMAGSGPqGNQGSPGMGY...NQQP.......................MmnqGP...................PGTMI.......G.....PG...................PGA.PGMnqnVPPNQVNPNQPPMGN.LNA.NMM..G.VNQAG..mP.......
  479-  615 (99.90/16.96)	...................................GP....G..P..MAPSQPG.............P........AQRRIIWRGDieyhdrvSTPNQRVSYKLN.CVIGSQVNQA...TKQSevnagtwpekmqlqllprvllmnV...MP...................AIKNAAR.....CvylnfQH...................QAPdPS........QPSNPQLSSEQaLQN.LCRLMS.NSYLGfihL..TPPCD
  643-  740 (128.47/24.76)	NAIK.QV.....FENHkkaqqqqqqqqqqqqQ.QQQQQQQQQ..Q..QQQKNKM.............M........MQSQQGPQGH.......AIPP.......P.G............GP.P.......................Q...GP...................PMANM.......G......P...................QGP.P.M...VSMAQ.........Q.M........G..GQMG...GqmGQQMG
  747-  867 (91.28/14.61)	..............RP............................................................GMMQQGPPLA.......SMAVQGQIAGQL.GN...PMNQQiamGGGP.......................H...QPthmgqrqmgiapqggmsnpQQQNVGMnpqglG.....QSgnpmagpmmggpgqqmmggNAP.QG.....AMMGPGPTGPG...........GP..QGQ.G...P..GGP.G
  870-  979 (121.27/22.80)	GADYaAM.....DERK...............Q.NLIKIQQLQ..Q..NLEAA..qqkelqykqqqqlP........GQGAVAAVGG..................L.GGMMAP..QN...GPRP.......................I...GP.....................GPQMR.....G..........................MAP.QG.....PQN.PQLKHLLQQQ.VQAqQMRLQGpQGMMQ...P..GP...
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     110.76|      38|      61|      28|      87|       5
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   38-   87 (60.33/67.63)	IVPTLEFFNGAPaddrdfgydsiSNCSY.......TLLAF..TAADSAPePA......CVTV..TPP
   97-  151 (50.43/20.27)	AFDKLLFGGGAA...........EQCSHigealatALQVFddLAACKGP.PAkegarhCILVcnSPP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13385 with Med25 domain of Kingdom Metazoa
Unable to open file!