<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13366
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MEQVYSVFRRSSSLPNAEWRERALKCSVSSRSALAFTADSLNGPGRVLSFEVYVTDLNTPWHPWRVLNHNEEITCLEWDSSGTRLMVGDAVGSILIFQMNNFLLNQWTLVSTTKFPGEHLLAGVWFHSGKKVAVNIEKKDSCMYLEKYSHLKFEPSMKRMGGKRSEGCLAISASGLVCVVLLCGNNTVVSSSQPLTYFRNRLQLVDLNYGKNGSIVAICSDGLSRSPVRCFAIVLVMDQDKCQINIEPFSGFCPNSQIEDGYRRVTHLRCVLKEASDAVVVSVTNGQQNILELWELTEETVSLHPLVGKCENRTSVSWRLHAVSSHSSPVAALATPRLSLYELSRPQSCIVVAFRDHSVKCFAREKLTCLSSVSTMVSPHAIKSQQHSQISYMCISHTGCVLIALDSLSQLALFRLPPVTEPAAPISVPFAATVLEYCLITGVDWWDVLVSLRPGLIEKVSEKLCEVFDKQPPGVQQFYESRFLAIKGSLYRLLNMGFIKAGDCHAQMMLSAVSCGIKALLRPRETKPDGSPADTLSALINDRAQVSNTMDKVLMNLDTKEFFVEPAILPSVQHHVQWVSDLALHLMASLPLQICQRQRFPGGGLIQDAKSINTIRELLVIFRMWGILSESCLPVYTRMTENLDVLGVLFKLLTKTLMNHGSEPDTTLLEECSVLPSQILIPSLDLASHSHEGVCGPALFVQPLPLALEFGVMADFVATHHHKTAGTVEGSVRSTSHTDIVRHISLGKHVVQVRKCTRCFSLSMLRSSQNLSVMRAWEQRWLRCCPCGGQWMLF |
Length | 794 |
Position | Tail |
Organism | Tropilaelaps mercedesae |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Chelicerata> Arachnida> Acari>
Parasitiformes> Mesostigmata> Gamasina> Dermanyssoidea> Laelapidae>
Tropilaelaps.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.071 |
Instability index | 46.18 |
Isoelectric point | 8.14 |
Molecular weight | 88268.41 |
Publications | PubMed=28327890
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP13366
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 521.06| 133| 184| 324| 464| 1
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190- 314 (116.67/73.36) .SSSQPLTYF.RNRLQLVDLNYGKNGSIVAIcSDglsrSP.VRCFAivlvMDQDKC....QINIEPFS.GFCPNSQIedGYRRVTHLRCVL..........................................keasdavvvsvtngqqniLELWELteeTV.SLHP.LVGKCENRT
324- 464 (208.67/160.52) SSHSSPVAALATPRLSLYELSRPQSCIVVAF.RD....HS.VKCFA....REKLTCLSSVSTMVSPHAIKSQQHSQI..SYMCISHTGCVLIALDSLSQLALFRLP..PVTEPAAPISvpfaaTVLEycLITG..................VDWWDV...LV.SLRPgLIEKVSEKL
511- 643 (195.72/128.61) SAVSCGIKALLRPRETKPDGS.PADTLSALI.ND....RAqVSNTM....DKVLMNLDTKEFFVEPAILPSVQH.HV..QW..VSDLALHLMASLPLQICQRQRFPggGLIQDAKSIN.....TIRE..LLVI..................FRMWGI...LSeSCLP.VYTRMTENL
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