<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13335

Description Serine/threonine-protein kinase ssn3
SequenceMPALSVNAAVSAALERQALEVEQFDHPSKTDSPNHVDASSTTKMNGTPYAPQRHINDFYDIVGFISSGTYGRVYKAINKRGNANASPAIHPSGRTIEAFAIKKFKPDKEGELQYTGISQSAIREMALCTELSHPALIHLVEIILESKCIFMVFEYAEHDLLQIIHHHSLLPRTPIPVSCLKSIMHQLLSGLLYLHQNWVIHRDLKPANIMVTSGGAIKIGDLGLARLFYKPLHALFTGDKVVVTIWYRAPELLLGSRHYTPAIDLWAVGCIFAELLSLRPIFKGEEAKQDSKKTVPFQRNQMGKIAEVLGLPKKQEWPLLTAMPEYQNLQSVSMHNPAVNRPATLEKWYRNVVSSNNYTAGPPDDTTVDLLRKLLEYDPLKRMTAEQALQHPLFIGADGNTAPPSWNCFEGLEQKYPARKVSTEAPEIGNGTMSGTKRAGAPDDSLRPPMSKKMREI
Length457
PositionKinase
OrganismRachicladosporium sp. CCFEE 5018
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Dothideomycetidae> Cladosporiales> Cladosporiaceae> Rachicladosporium> unclassified Rachicladosporium.
Aromaticity0.08
Grand average of hydropathy-0.277
Instability index51.30
Isoelectric point8.59
Molecular weight50903.02
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13335
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     176.87|      45|      77|     321|     365|       1
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  321-  365 (81.08/54.77)	TAMPEYQNLQSVSMHNPAVNRPATLEKWYRNVVSSNNYTAGPPDD
  372-  392 (18.91/ 7.08)	RKLLEYDPLKRMTAEQ.ALQHP.......................
  401-  444 (76.88/51.55)	TAPPSWNCFEGLEQKYPA.RKVSTEAPEIGNGTMSGTKRAGAPDD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13335 with CDK8 domain of Kingdom Fungi
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