<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13230

Description Uncharacterized protein
SequenceMNPGEFPNPGAGPGRPAPNTAMRMNANMQVPKNDSVQAMMTYVAQMLQNQGPYGGWKAEVPIKTRATNVYQMITSLRLIQPRIDLHQAAQAAMAFELKAFTKANEKIEYEKECNEKLLHIRNTRERQAAVAYQSGMMPQTGAGQNQIPGAFPQHLNQGMQASPVSGQQQMAMGMNGQNQQAAMQQQQRQQQQSQAMIQQQQQQQQQQQQQQQQQQQQQQQQQRAQQRPGNGIPMVDDLSTLSAQDLDHVSRLANEMLNKTSPEDMEKIKSNLSNMTPEQRQYLARKNLEPMTYFFRSQALNQIRRHRRARLEMGARAPNAGVDANGNMMGDPMMNSQHQRQMLQNMLNLQRNSAFPGNPGQTMEPPNFIGNVENIQGQQADGLRSQEAGQLVVPASSSQMNQAPFPNNNNNMFPQQMGQNSQVNMNANNPNAQAQFLAQQHLQGGSNTPQDRMQFQAQQSQAQAQAQARAQAAQKAQMAMSGHASQLTPQSQPQLNGQSPVMPMLNQPMAPGQMSPVQVPAQARPPSRPANMGQHPAGVAGQAAMQGPPQIPSNIPPHIQEQLARMPPEQARAFIMQQRRAALNNMARANPGQQPQPQPGQAQPMMNNQMGNAMMRASMGGPQDLNSGGIPQGQQMTQQQRQQRQNEAYKLQLLRQQNNGVEMTPEQGKQMDRVSFPPSILNMNGTSMQVPNNVKSWGQLKQWAISNPQVASPNDLPRLMMLQKLHLGQLLSASTNQVRDQNGQGSAATPFQSTQAPFANAQGFPPGQQPTAINMAAMRQISAQDIQMARQKFGHQAANFTDEQIQKILYQNRQKQMMQAAQNRAMQLEGSTQPGQLSQPPAQPPIPAAQPIPQIKPQHPQPPQSTPQAANAKTQTAAAAKASKGATGKQPSKKRPSADDSTEARVTTTPQMSQPVAVPGAAGTTPQRPGLPFTQEQLAQMPPHQRAQFEAHMRRQQSQSRGQVLSRAAAEEAWNRNLPPQVMEVYNDIAKNAPPAKPMPVSPEQKAAMTKQLRDALDVLGRLDALVQWFAKMQGQEKNVKNLLAMRIQLMRQFKPSPDWVVNDHFTVSSDYLTGAILFMRKLFTVMISRMQQQGQRPSVSQPPGSNAQALQGNMPALNATNLQHLQAQEEALQRARRASSQSVANVPTAPFAAPSPRGVPQYAPGGLAPENLKLPPPKKRKQSHGVASSPIQATATPGAAAKYNKAVADATSNAAAMADAFKCSVVECQHHYQGFPTQAVLDKHVEECHQPEEEEVIEDPLKYYHESISMGLGLNPNDSLETQQTATPAPVPPSIKPNATASPTKQSIATPLISNNTPMARVTSQFGAKTASPAPSTQLPTPQLSSLKGTKPVEKDGKKDVIKLEESDTKDPWADCPTSLDTIHDTFSNLASKDLPHLGYDSLEDFDINEATPVDDDWAAFASLTPPDEAQEAAFLERFYEPWDDESIQLAAERMRIPPEIQVKGIGPMGQLEVDWDAVARYEREGIRIRMPK
Length1494
PositionTail
OrganismPenicillium vulpinum
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium.
Aromaticity0.04
Grand average of hydropathy-0.800
Instability index57.19
Isoelectric point9.42
Molecular weight164159.26
Publications
PubMed=28368369

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13230
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.25|      21|      21|     184|     204|       1
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  151-  171 (32.53/ 7.03)	FPQHLNQGM...QASPVSGQQQMA
  172-  195 (30.73/ 6.13)	MGMNGQNQQaamQQQQRQQQQSQA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            13|    1042.45|     100|     100|     399|     498|       3
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    1-  150 (76.33/15.24)	.MNP...GE.FPNPGAG...............PGRP.APNTAM.......RMNA......NmqvpkN..DS..V..QammtyvA...QM......LQ....NQGP.YG..GwkAEVPiktratnvyqmitslrliQP..............RI..D...LhQA....AQAAMAFELKAFTKANEKieyekecnekllhirntrerqaAVAYQSGMMPQ.TGAGQNQ.I...PGA
  264-  327 (71.42/13.73)	DM.....EK.IKSNLSNM.............TPEQ................................................R...QY......LA....RKNL.E.........P..................M................T..Y...F.FR....SQALNQIRRHRR............................ARLEMGARA....PNAGVD.A...NGN
  328-  397 (59.91/10.19)	MMGD....P.MMNSQHQ................RQM.LQN.ML.......NLQR......N.....SafPG..N..P......G...QT......ME....PPNF.IG..N..VENI..................QG..............Q...Q...A.DG....LRSQEAGQLVVPASS....................................................
  399-  498 (181.88/47.69)	QMNQ...AP.FPNNNNNM.............FPQQM.GQNSQV.......NMNA......N.....N..PN..A..Q......A...QF......LA....QQHL.QG..G..SNTP..................QD..............RM..Q...F.QA....QQSQAQAQAQARAQAAQK......................AQMAMSGHASQLTPQSQPQ.L...NGQ
  499-  601 (102.03/23.14)	.......SPvMPMLNQPM.............APGQM.SP.VQV.......PAQA......R.....P..PS..R..P......AnmgQH......PAgvagQAAM.QG..P..PQIP..................SN..............IP..P...H.IQ....EQLARMPPEQARAFIMQQ......................RRAALNNMA.RANPGQQPQpQ...PGQ
  602-  657 (54.22/ 8.44)	..............AQPM.............MNNQM.G................................N..AmmR......A...SM......GG....PQDL.NS..G...GIP..................QG...............................QQMTQQQRQQRQNEAYK......................L.........QLLRQ...Q........
  658-  744 (68.55/12.85)	............NNGVEM.............TPEQG.KQMDRVsfppsilNMNGtsmqvpN.....N..VK..S..W......G...Q.......LK....QWAI........SN.P..................Q................................V..ASPNDLPRLMMLQK......................L......HLGQLLSASTNQ.VrdqNGQ
  752-  834 (83.07/17.31)	QSTQ...AP.FANAQG...............FPPGQ..QPTAI.......NMAA.....mR.....Q..IS..A..Q......D...IQ......MA....RQKFgHQ..A..ANFT..................DE..............QI..QkilY.QN....RQKQMMQAAQNRAM....................................QLEGSTQP.........
  835-  905 (66.67/12.27)	.....................................GQLSQP.......PAQP......P.....I..PA..A..Q....piP...Q.......IK....PQHP.QP..P..QSTP..................Q..................................AANAKTQT.AAAAKA......................SKGATGKQPSKKRPSADDS.T...EAR
  911-  989 (81.03/16.68)	QMSQ..pVA.VPGAAGTT..............PQRP.GLP.......................................................FT....QEQL.....A..QMPP..................HQ..............RA..Q...F.EAhmrrQQSQSRGQVLSRA.AAEE......................AW......NRNLPPQVMEV.Y...NDI
 1012- 1129 (61.94/10.81)	QLRD...A..........ldvlgrldalvqwFAKMQ.GQEKNV......kNLLA......M.....R..IQ..L..M......R...QFkpspdwVV....NDHF.TV..S..SDYL..................TGailfmrklftvmisRM..Q...Q.QG....QRPSVSQPPGSNAQALQ.............................GNMPALNATNLQH.L...QAQ
 1143- 1245 (88.84/19.08)	SVANvptAP.FAAPSPRG.............VPQYApGGLAPE.......NLKL......P.....P..PKkrK..Q......S...HG......VA....SSPI.Q...A..TATP..................GA..............AA..K...Y.NK....AVADATSNAAAMADAF.K......................CSVVECQHHYQGFP.TQAV.L...DKH
 1272- 1339 (46.56/ 6.09)	GLGL...NP.....NDSL.............ETQQT.ATPAPV.......PPSI............K..PN..A..T......A...SP......TK....QSIA.TPliS..NNTP..................MA..............RVtsQ...F.GA....KTASPAPSTQ.........................................................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     141.70|      31|      31|    1402|    1432|       4
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 1372- 1401 (51.35/31.49)	DP..WADCPTSLDT.IHDTFSNLAS..KDLPHLGY
 1402- 1432 (53.59/33.22)	DS..LEDFDINEATPVDDDWAAFAS..LTPPDEAQ
 1433- 1463 (36.76/20.28)	EAafLERF....YEPWDDESIQLAAerMRIPPEIQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13230 with Med15 domain of Kingdom Fungi
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