<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13197
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MLPDRAIPEQWRTFLHQCLANRIDIDEFTDLSGLMFARSPVKENELLDLLLEARASSSVTWDPLLPLYVDGLCKVGRVKSSSALASLLKHSSIVDASGSGEVEGEGQGSSSKSKKQKPSTLMTDIKVIQDVMVFISTGSIPKTVIEAADIYSATVDWILAVVAWHNHSVDASQQTGGLMGSPDAVSLFESLGILLAALSGTSKGLEVLSSDFNQALKAKLGQALSSYLPLCIDVSLPLRHRLEELQKVFNLYPGQPSKALHGPAIDGVNVNALQFESSVMDGPVVNTRAGLYVYINSMVVGRPLVDDTILINYLTNRYQGHNDVLIEEIITAAFDVLSNGVYRNESGRTMLLFRSFLVNKLPAFFAAISAASMVPISMEMCISHALSRLDPNAFPSFSQMFSMQGSSVLSDARQEFLFACASHKLIRESSIEQLLGENPMQTLPGGGPYVKDDLVSQINNNHERTEQLIGEIESMEGNAGAIVGAVVDVMHNLCHQRETVTLKNICNSLSRRPQTLDVMLLFRTTKQVLQPLCAILDSWKWDEDQGENQPVYDEFGSILLLVLAFKYRYDLSPSDMGISNNDSFLLKLLDRGACSQKLSDLSEKQNNDLGAWIGALFIAEGISEETMSSCSPHEFYMLVTTLFDQSLGACESGKLDFDTLKGGFEYLLEPFLLPSLVVALTWLGNHIWESETDPTIPIKTLHSLVKPSSISGEAQAIHQTVLNITGCPLEEQLKNVRTRNQSRTDIKPILDALEPYISFRRVGSCRRSELDTWTSHSAGGLIASIRTTLQALVLWSANPGISMAPHAYTHRQVLAGIRMLGATRVLGAIIDEVKQQSEAGSGHIALDIATTMVCAPMTESFAVDQNNYHPVDTSKEALPRCAILTLRDALALQHENVPKISESDPLRAEVVVRLARRVNMLMAPPSQVSNIDVSNIIQNMHLGVEGQEDRMDLEPSAADVERNTVNEDDPDNINQMLDKAAADAAAAGMDGGIGVGQDMGLDSGAGMDAIDDVLNAADMAVGNPEFLDLDMEDL |
Length | 1034 |
Position | Tail |
Organism | Penicillium solitum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.029 |
Instability index | 43.56 |
Isoelectric point | 4.78 |
Molecular weight | 112675.02 |
Publications | PubMed=28368369
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 ARBA:ARBA00003669
ECO:0000256 RuleBase:RU364142
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP13197
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 106.20| 26| 72| 84| 109| 1
---------------------------------------------------------------------------
84- 109 (43.34/26.63) LASLLKHSSIVDASGSGEVEGEGQGS
159- 181 (39.36/23.48) LAVVAWHNHSVDAS...QQTGGLMGS
184- 204 (23.49/10.92) AVSLFESLGILLAALSGTSKG.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 287.23| 92| 620| 250| 345| 2
---------------------------------------------------------------------------
250- 345 (149.09/117.68) NLYPGQPSK.ALHGPAIDGV.NVNALQFESSVMDGPVVNTRAGLYVYIN...SMVVGRP....LVDDTILINYLTNRYQGHNDVLieEIITAAFDVLSNGVyrNE
867- 967 (138.14/96.31) NYHPVDTSKeALPRCAILTLrDALALQHENVPKISESDPLRAEVVVRLArrvNMLMAPPsqvsNIDVSNIIQNMHLGVEGQEDRM..DLEPSAADVERNTV..NE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.48| 27| 31| 432| 462| 3
---------------------------------------------------------------------------
432- 460 (43.02/26.39) EQLLGEnpMQTLPGGGPYVKDDLVSQINN
466- 492 (43.46/23.03) EQLIGE..IESMEGNAGAIVGAVVDVMHN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.75| 22| 25| 981| 1002| 4
---------------------------------------------------------------------------
981- 1002 (37.77/24.44) AADAAAAGMDGGIGVGQDMGLD
1009- 1030 (36.98/23.77) AIDDVLNAADMAVGNPEFLDLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 100.09| 31| 620| 123| 153| 5
---------------------------------------------------------------------------
123- 153 (52.73/39.68) TDIKVIQDVM.VFIS...TGSIPKTVIEAADIYSA
744- 778 (47.35/34.80) TDIKPILDALePYISfrrVGSCRRSELDTWTSHSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.62| 23| 300| 387| 420| 8
---------------------------------------------------------------------------
359- 381 (40.51/27.00) NKLPAF...FAAISAASMVPISMEM...C
392- 420 (31.11/28.89) NAFPSFsqmFSMQGSSVLSDARQEFlfaC
---------------------------------------------------------------------------
|