<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13184

Description Uncharacterized protein
SequenceMSSQAYHGHSATSRQFPAYNPVAATAAPAGTLLPGTKVQVGSHRVVVEKYLSEGGFAHVYVVRLPQAVNGSETAVLKRVAVPDKAALANMRTEVETMKKLKGHRHIVKYIDSHASQLRGGGYEVFLIMEYCAGGGLIDFMNTRLQHRLTEPEIVKIFSDVAEGVACMHYLKPPLLHRDLKVENVLISGKGSSATYKLCDFGSSAPPRPAATSAAEGRLIEDDVQRHTTLQYRSPEMIDVYRKQPIDEKSDIWALGVFLYKLCYYTTPFEEVGQMAILNATFKYPSYPSFSPRLKLLVGSMLKEDPRNRPNIYEVVREACKMQGKDIPIKDIYSNRSISEARKYQELPPTPVEAPAPGATFTPPVQETEIIPEIAPMRRGRPGKPQSSHPSSARPSPSPYRPPAVGSSTDPFAALDGGAPRKKTLEETSKRFPSLDQFDILHEKGDKFEFEPAVAESKSEDEDLSQRLTNALADDAFARHQSPEREQKPAFKRPSEASPVRSPNAREVPTRQPAPLYQPTPQRPTMVSTGTMTSPAQTPRLPEPKISSRPIYRFPSSDNERPSSQSWKAEEQAPSPPMSGLKPEASPRLSSDHMSTLSNSARPSMETLRRPSGLEVNDPVRSKSAVPKARPLSVQSPARYDLPRDSESPRSSLDMSRAQYEGGAPLRSVRTDIDRDADRAKISSDVDYLRAMEEEESNRKREKRSSGSHKHKQRGSLSTLSLSGGKNLFAGRFGDAFRRFEAGNQDKPSTPPSEGVPQQVLIGGSDSGEERFSPDNEIAMKDADRDDISPEMRRELERRRLSQEEKRVASAAAEYRRRVAEKGDGGRSASDGPRSRTIQDKMQSLLGESNKPVVPKTATGYGRFTETSSPLQAKQSETQPISCKIPASRTSGPSYNSREGSIAIPDRREDNSAPAGLPHSGKTPSYPPTQRPAARPTAPPKPKNLRVGGDTSRPGSSKGQGQSPSFQTIPASPGGEDWEANFSKRFPSLSGLEMETEIEIPKYANRSRSPPLVSPRKTKTNLTCPLLRLFFRVQAMAPVTLKTVDDDLKEVIQHLFEIQSAVHGYLGPETQQELVRKIKNLTLALSTLSTHTQPSSNSETQQEQNQNIDPSNPPLSSIQLPPEIIDYVDSARNPDIYTREFVELVQRGNQDLRGKREAFGSFRDVLAREMRSAMPECRGEVDRVVVASGGTVPESDGGN
Length1198
PositionMiddle
OrganismPenicillium antarcticum
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium.
Aromaticity0.06
Grand average of hydropathy-0.763
Instability index67.92
Isoelectric point9.12
Molecular weight132048.70
Publications
PubMed=28368369

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13184
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            10|     467.72|      59|      59|     536|     594|       1
---------------------------------------------------------------------------
  322-  366 (32.19/ 6.99)	.....Q..G.KDIP.....I..KDIyS...NR............SI................................S.EARKYQE....LPPTPveaPAP.G..ATFTPPVQE..
  370-  410 (47.76/13.78)	............IP.....EiaPMR.R...GR............PG.K........PQ.SSH..............PSS.AR...........PSP.....S.PYRPPAVGS.STDP
  411-  483 (39.89/10.35)	FA..aL..D.GGAP.....R..KKT.L...EE............TS.K......RFPS.LDQfdilhEKgdkfefePAV.AESKSED....EDLSQ...RLTnALADDAFARHQSPE
  484-  530 (57.19/17.90)	RE...Q..K.PAFK.....R..PSE.A...S.............PV........RSPN.A.R.....EV.......PTR.Q............PA....PLY.QPTPQRPTMVSTGT
  531-  592 (100.55/36.82)	MTspaQ..T.PRLP.....E..PKI.S...SR............PI.Y......RFPS.SDN.....ER.......PSS.QSWKAEE....QAPSP...PMS.GLKPEASPRLSSDH
  636-  710 (35.85/ 8.59)	PA...RydL.PRDS.....E.sPRS.SldmSR............AQ.YeggaplRSVR.TDI.....DR.......DAD.RAKISSDvdylRAMEE...EES.NRKREKRSSGSHKH
  712-  775 (44.26/12.25)	.....Q..R.GSLS.....T..LSL.S.....ggknlfagrfgdAF.R......RFEA.GNQ.....DK.......PST.P...PSE....GVPQQ...VLI.GGSDSGEERFSPDN
  789-  833 (30.36/ 6.19)	.............P.....E..MR.......R............ELeR......RRLS.QEE.....KR.......VAS.AAAEYRR....RVAEK...GDG.GRSASDGPR.....
  849-  891 (43.52/11.94)	.....N..K.PVVP.....K......T...AT............GY.G......RF...TET.....SS.......P.L.QAKQSET....Q.......PIS.CKIP.AS.RTSG..
  966- 1020 (36.14/ 8.72)	.....Q..TiPASPggedwE..ANF.S...K.......................RFPSlSGL.....EM.......ETEiEIPKYAN....RSRSP...PL.......VSPRKTKTN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.45|      24|      84|     132|     157|       3
---------------------------------------------------------------------------
  132-  157 (40.01/36.61)	AGGGLI..DFM.NTRLQHRltEPEIVKIF
  214-  240 (35.44/24.91)	AEGRLIedDVQrHTTLQYR..SPEMIDVY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.82|      29|      59|      21|      51|       4
---------------------------------------------------------------------------
   21-   51 (40.47/43.54)	PVAATAAPAGTLLPGTKvQVGSHRVVVeKYL
   82-  110 (50.35/41.47)	PDKAALANMRTEVETMK.KLKGHRHIV.KYI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.59|      16|      28|     913|     935|       6
---------------------------------------------------------------------------
  602-  617 (25.91/ 8.26)	PSMETLRRPS..........GLEV..ND
  923-  950 (15.69/15.89)	PSYPPTQRPAarptappkpkNLRVggDT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.87|      25|      27|    1067|    1093|       7
---------------------------------------------------------------------------
 1067- 1093 (37.86/28.74)	PETQQELVRKIKNLTLALStlSTHTQP
 1097- 1121 (46.02/28.85)	SETQQEQNQNIDPSNPPLS..SIQLPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.22|      15|      17|    1159|    1175|       8
---------------------------------------------------------------------------
 1159- 1175 (22.00/20.73)	GSF.RDVLARemRSAMPE
 1178- 1193 (21.22/11.84)	GEVdRVVVAS..GGTVPE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13184 with Med10 domain of Kingdom Fungi
Unable to open file!