<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13159
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLIMEDGINVDDLFGEPNSLELGLPAASPIKGLAQCLDEMRLLGCCQKIVWSRMGCIASISPDGLRVIVRHLQCRPSDGKWVLGEESSLAPVLEAHNGNQLAHLSWNETGSDLAVVDCSGRISIYSISIALNSITGLRQASFDSGDDGSQVVGMMWLNSQRYVHAFHQAAKVNGRWAYSPFRRRPVGPFHPANKGALICVTRAGQIKLIYQNPDSKWAELPAELKNTGYSDRLLTHAAMTATQAGILLSTYSACQKMCLYRVHISWNPAQWEPAQGKPPGQFPIPTFRLIHCKVDMPSNILNINRGPDHSDQSLPFLNSVYSLTRLEIMPGQFDSPAGSTANPWILAVLSKPLHAIHDYPDQQGPPSVIVRWHLESAPQILHPKFDEVTSKKNNAQVKPKMELRRLEDVYCDKYIVSVDLIEHGTVLAVSHDDSSITCYDTRTMTVLNGLDDSTTVTCLAQAGFQYPLETSGLHIAFSPNACVAVTLDNDGRMQLRVMEHSFGSTGGLYDENNFSAAIAALTLAFSRGCGVDFNTDDILMVALGQLSPEAQTTFISEVYRALPVNCNFTAEQDKLMSHPYIPRCLSLQAGLGFKGRLKRRNLSSAVPWASLQLRHASVLFAYFFQYNKGGQTESHDPDVLRMVLGNTKWTLDFSHFLLNEIFDMADEFEDVYHDPEAFTQKLKNSSSLPLLILLSSMSRAFLRFICRGLRGVNAGFASANPASLVGDSRIYYTEICQTLESSPVRIDVYEKFLAGVDSAVKHAYQGAGFGDAERPGPEKELLVNARIPPVLTTAVATLLRQTVPALKSEINRRAIYLGDYGWLGFGNDRRTALYRKQREVDILKKCPLRPPLPLGNDGRVAPLKKRRCARCCEVSGDTNLPRSLLSFKMIAKLGLLRSCLCGGMWVLETDTGDLGTRTASTNGNSNRVSQA |
Length | 932 |
Position | Tail |
Organism | Penicillium polonicum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.156 |
Instability index | 42.99 |
Isoelectric point | 7.51 |
Molecular weight | 102783.43 |
Publications | PubMed=28368369
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP13159
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 94.79| 27| 36| 621| 655| 1
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621- 647 (48.24/41.08) FAYFFQYNKGGQTESHDPDVLRMVLGN
659- 685 (46.55/22.50) LNEIFDMADEFEDVYHDPEAFTQKLKN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.89| 16| 27| 824| 839| 2
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824- 839 (30.15/19.00) LGFGNDRRTALYRKQR
853- 868 (29.74/18.64) LPLGNDGRVAPLKKRR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.75| 16| 45| 474| 491| 3
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474- 491 (20.55/24.97) LHIAFSpNACvAVTLDND
522- 537 (30.20/21.68) LTLAFS.RGC.GVDFNTD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 131.87| 32| 38| 174| 205| 4
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174- 205 (59.25/36.03) NGRW...AYSPFRRRPVGPFHPANKGALICVTRAG
215- 246 (53.11/31.53) DSKW...AELPAELKNTGYSDRLLTHAAMTATQAG
264- 283 (19.51/ 6.88) HISWnpaQWEPAQGKPPGQF...............
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 136.72| 42| 261| 297| 345| 5
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297- 343 (64.75/53.03) MPSNILNINrgpDHSDQSLPflNSVYSLTRLE....IMPGQFDSPAGSTAN
350- 395 (71.98/36.97) LSKPLHAIH...DYPDQQGP..PSVIVRWHLEsapqILHPKFDEVTSKKNN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 185.70| 57| 370| 40| 101| 7
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40- 101 (100.68/73.06) EMRLLG..CCQKIVWS....RMGCIASISPDGlrvivRHLQCRPSDGKWVL.GEESSLAPVLEAHNGNQ
403- 466 (85.02/52.57) ELRRLEdvYCDKYIVSvdliEHGTVLAVSHDD.....SSITCYDTRTMTVLnGLDDSTTVTCLAQAGFQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.19| 12| 27| 699| 710| 11
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699- 710 (22.44/12.93) SRAFLRFICRGL
729- 740 (22.75/13.20) SRIYYTEICQTL
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