<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13074

Description U-box domain-containing protein 34-like
SequenceMPSGRGSWKGTPGSDKRSSVIERNSNIDYIRIPLRDRPPSSTKNVHNSSSMDGLDISVRNPMGSGFRDSLSDDSEHFRDFGSRSMDITSENIDFGNSSDSPTHPSQSSVKDIEAEMKRLKLELKQTMEMYSTACKEAISAKQKALELHQWKVEEARKFQEARMAEEAALAIAEREKAKCKAAIEAAEAAQRLAEIEANKRRIRALDALSKHDIRYRKYSIDEIEVATERFAESLKIGEGGYGPVYKAFLDHTPVAIKVLRPDAAQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMDNGSLEDRLFRRENTPAIPWQIRFKIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSAAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHHVERAIERGTFAEILDQSVTDWPVEEAFKYAKLALKCAELRRKDRPDLGTVVLPELNRLRDLGNNEISNLGGMSFGPRSYHAHSRQRMSNPGSNPNSSASSEAMSDPNVAIEPA
Length551
PositionTail
OrganismNelumbo nucifera (Sacred lotus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Proteales> Nelumbonaceae> Nelumbo.
Aromaticity0.06
Grand average of hydropathy-0.505
Instability index52.15
Isoelectric point6.70
Molecular weight61555.18
Publications
PubMed=23663246

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13074
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.80|      22|      23|     154|     175|       1
---------------------------------------------------------------------------
  135-  156 (16.88/ 7.59)	..KEAISAKQKALELHQ..wkveEAR
  157-  175 (25.13/14.74)	KFQEARMAEEAALAIAERE.......
  178-  199 (34.79/23.10)	KCKAAIEAAEAAQRLAEIE....ANK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.40|      38|     215|     223|     262|       2
---------------------------------------------------------------------------
  223-  262 (59.85/57.29)	IEVATER..FAESLKIGEGGYgPVYKAFlDHTPVAIKVL......RPD
  439-  484 (57.55/43.93)	VERAIERgtFAEILDQSVTDW.PVEEAF.KYAKLALKCAelrrkdRPD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.50|      22|     338|      21|      45|       3
---------------------------------------------------------------------------
   23-   44 (39.28/33.96)	RNSNIDYIRIPLRDRPPSSTKN
   47-   68 (37.22/18.69)	NSSSMDGLDISVRNPMGSGFRD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13074 with Med32 domain of Kingdom Viridiplantae
Unable to open file!