<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13032
Description |
mediator of RNA polymerase II transcription subunit 36a-like |
Sequence | MRPPRGRGGGGGFRGRGDGGRGRGGGGRGGDRGGSATKSRGGGRGGRGGGRGGGGRGGMKGGSKVIVEPHRHEGVFVAKGKEDALVTKNMVPGQAVYNEKRIAVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDNIWIKPGAKVLYLGAASGTTVSHVSDVVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGYRMPKKQKAAA |
Length | 303 |
Position | Unknown |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.412 |
Instability index | 33.46 |
Isoelectric point | 10.20 |
Molecular weight | 32103.26 |
Publications | PubMed=25893780
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Function
Annotated function |
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GO - Cellular Component | box C/D RNP complex GO:0031428 IBA:GO_Central
Cajal body GO:0015030 IBA:GO_Central
small-subunit processome GO:0032040 IBA:GO_Central
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GO - Biological Function | histone-glutamine methyltransferase activity GO:1990259 IBA:GO_Central
RNA binding GO:0003723 IBA:GO_Central
rRNA methyltransferase activity GO:0008649 IBA:GO_Central
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GO - Biological Process | box C/D RNA 3'-end processing GO:0000494 IBA:GO_Central
histone glutamine methylation GO:1990258 IBA:GO_Central
rRNA methylation GO:0031167 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP13032
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 227.79| 57| 159| 74| 131| 3
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74- 131 (89.92/74.35) GVFVAKGKEDALVTKNMVPGQAVYNEKR..................IAVQNEDGTKVEYRVWNPFRSKlAAAVLGG
147- 206 (45.69/30.93) G..AASGTTVSHVSDVVGPNGVVYAVEFshrsgrdlvnmakkrtnvIPIIEDARHPAKYRML..............
238- 292 (92.18/71.21) GHFVISIKANCI..DSTVPAEAVFQSEV..................KKLQQEQFKPFEQVTLEPFERD.HACVVGG
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