<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13020
Description |
mediator of RNA polymerase II transcription subunit 33B-like isoform X2 |
Sequence | MEVGTVWESVLEQTKSAQDKNSDPLVWAVQLSSRLNSAGVSLPSIDLAHLLVSHICWDNHLPITWKFLEKALTANFVPPMLVLALLSTRVIPKRKFHPTAYRLYMELLRRHAFPLKCQINGLNYQKIMKSIDDVLHLSLIFGVQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPEKRSIWPTVTQDMEIDTADNFNETRSAHHDVLYKGNTIIAIEIIVEFLQNKVTSRILFLARRNMPSHWEAFIQQLRVLAAKSVALRNSKHITPEKLLQLTSDTHNVLSRECKRISQQVLHAVMGDGSLTSPSGQWHGTSPSALWLPIDMFLEDAMAGPQVAASGAIDRLAGLVKALQAVNGTTWHDAFLGLWIAALRLVQRERDIIEGPVPRLDTCLCMLLSITTLVVANIVEEEESELIDETDGSPSNPTKEKQTTGRCRKGLISSLQMLGDYEALLTPPQAVCSVANQAAAKAIMFHSGRTVGNGYYECMSINDMPMNCSGNLRHLIIEACISRNLLDTSAYLWPGYVNVRANIPLSVPSQVPGWSSLMKGSPLTPTLINALVATPASSLPEIEKIYEIATKGSDDEKISAASILCGASLVRGWNIQEQVVLFIISLLSPPVPADYSGSESHLIRYAPFFNVLLVGISPVDCIQIFSLHGMVPLLAGALMPLCEVFGSTAPNGSWTLPTGEELTSHAVFSNAFTILLMLWKFDHPPVEHVMRDATPVGSERSPDYLLLVRNSKLSAFGKSAKDHLKIRRMSKILNFCMEPIFMDSFPKLKRWYRQHQKCIASTLSGLVQGTTVHQIVDALLNMMFRKIGRAAQSSTSTTSGSSSSSASGAEDILARLKVPAWDILEGAPYVLDAALTACAHGRIAPRELATGLKDLADFLPATLGTIISYFSAEVTRGIWKPVFMNGTDWPSPLANLSVVLQQIKKFIAATGVDVPSLETGGSSPAMLPLPLAALVSLTITYKLDKSSERSLVLLGPAMSSLGGSCPWPCMPIISALWAQKVKRWNDFLVFSSARTVFHHNSDAVVQLLRSCFTATLGLSPSIMCSNGGVGALLGHGFGSHFSGGMAPVSPGIMYLRSHRTIRDIMFMTEEIVSLLMFSVKEIASRLSQEKMEKLKKTTFGLRYGQVSLGTAMTRVKLAASLGASLVWLSGGLSLVQSLIKETLPSWFISAHTPELDRGEPGGVVSMLRGYALAYFAVLCGTFAWGVDSVSPESRRRPKVLDSHLEFVASALDGKISLGCDYATWRAYVTGFVSLMVGCTHKWVLDVNVDVLKRLSNGLRQWNEEELAIALLGLGGATATGTAAELIVEIGA |
Length | 1322 |
Position | Tail |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.176 |
Instability index | 46.63 |
Isoelectric point | 6.92 |
Molecular weight | 144313.82 |
Publications | PubMed=25893780
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP13020
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 119.33| 37| 152| 1021| 1061| 1
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1021- 1061 (59.85/49.45) FSSART..VFHHNSDAVVQLLRSCFTATLglspSIMCSNGGVG
1178- 1216 (59.48/38.41) FISAHTpeLDRGEPGGVVSMLRGYALAYF....AVLCGTFAWG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.16| 16| 153| 983| 998| 2
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983- 998 (34.27/16.26) VLLGPAM......SSLGGSCPW
1137- 1158 (23.89/ 9.38) VSLGTAMtrvklaASLGASLVW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 425.32| 120| 496| 340| 461| 8
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303- 381 (105.15/64.33) ...............................................D......GSLTSPS..GQWHGTSPSALWLPIDMFL.E.DAMAGPQVAASGAIDRLAGlvKALQAVNGTTWHDA.FLGLWIAALRL..VQRER
382- 504 (196.20/117.59) D.IIEGPVPR..LDTCLCMLLSITTLVVANI...VEEE.ESELIDETD......GSPSNPTKEKQTTGRCRKGLISSLQMLG.DYEALLTPPQAVCSVANQAAA..KAIMFHSGRTVGNGyYECMSINDMPMncSGNLR
505- 557 (36.08/14.60) HlIIEACISRnlLDTS.AYLWPGYVNVRANIplsVPSQ.VPGWSSLMK......GSPLTPT..............................................................................
853- 932 (87.87/47.75) D.ILEGAPYV..LDAAL......TACAHGRI...APRElATGLKDLADflpatlGTIISYFSAEVTRG.....IWKPVFMNGtDWPS....PLANLSVVLQ......................................
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