<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13016
Description |
mediator of RNA polymerase II transcription subunit 12-like |
Sequence | MQRYHGAGCTSAVNNSAIGGASARDTSRADSSSLPPNFQFNSRRQSQLASYKLKCDKEPLNCRLGPPDFHPQSQTCPEETLTRENVQQGYKDTINGLEDSKEISLTQIQAFTKPVVLKCRDAIRKCLRAINETRAQKRKAGQVYGIPLSGSLLSKPGVFPEQRPCSEDFRKKWIEGLSQQNKSLCSLADQVPLGYKNRTLIEVLIRNNVPLLRATWFIKVTYLNQVRPGSAISTGSLDKAQLSRTELWTKDVIDYLQHLLDEIFSRNNSHFTQHGRDRLPQMHNAASLQHRSAPASATLDGEEPSLQFKWLYVVRLLQWHHAEGLVLPSLIIDWVLNQLQEKELLEILQLLLPIVYGVLETVILCQTYVRNLVAIAIRFIREPSPGGADLVDNSRRAYTVSALVEMLRYLIQAVPDTFVALDCFPLPTCVVSHAFSDGGFLSKSSDDAGKIKSNSADAYVVKVKGFDSQYQSLSFDHVVSTIHKCADNLAKGASAGYPSQSMAKAVQTLDKALLHGDLIEAYKHIFDDLCDGAVGEGWVAEVSPCLRSSLKWLQTVNLSLICSVFFLCEWATCDFRDFRTAPPHNLKFTGRKDFSQIYLAIHLLKLKREEWQNPEYKRGRASGLYSTAKNTSYQNNYSRRNLLGNIYEAKSNGKYVNGRSSSSSDIFDSPGPLHDIIVCWIDQHEGLKGEGGKRLQLLILELIRSGIFYPQAYVRQLIVSGIIDISRPMADLDRRKRHHRILKQLPGQYMLDILEEARIAKGSELLEAVNVYSNERRLALHNLLFDQHNCANTSHVSTNDKKSHSTSGRDGAFQVSGDQWKTLQSSKTFRRDVDLEGLKASISVLLQFPSLSSTSADSGVEESQGSSKRSVGSTCNKPDMFEGAPGYEDRKRVKRQKLSEDKSLYLQAPSPIPSDDEDTWWMRKGQKNIESFKSDPPHKSTKQVSRGRQKTVRKTQSLAQLAAARIEGSQGASTSHICDNKINCSHHRTEVETLKPVDGIRTTHFGDIVSIEKGLKQLRFVEKRIVMVWLISVVKQLVEESEKSVAKAGQYGRPFIAADEKSPLRWKLGEDELSVILHLMDVSCDSVSAIKFLLWLLPIVSSNPGPTVHSGRNSLRVPRNVDNCACAVGEAYLLSSLRRYENILIAADLVPEALSAIMLRAAAIMATNGRVTGSGTLVFAWYLLKKYGKVASVIEWEKKYKGACDKRLFSELESGQQEGDFGFPFGVPGGIEDPDDYFRKKITGGRFLRVGLSMRDMVQRHVDDVLHSILGKERKLVAAGAPKTPAVEKGGDGYQVAQQIIMGLMDCIRQTGGAAQEGDPGLVSSAVSAIVGNVGSTLAKIPDFTGGSNYSNYQPSISSLSFAKRILRIHLICLCLLKEALGERQSRAFEVALGTEASSALAVAFAPAKSSRGQFKLSPDAPESSANISGDNLNSSAKSTLGRTTKMSAAISALLLGAVVHGVISLERMVTVLRLKEGLDVVQFVRSTKTSSNGNARSVGAFKLDNSFEIYVHWFRLFVGNCRTVCDGLVLELLGEQPIVALSRMQRLLPINLVFPPAYAIFAFVIWKPFILSSNIASREDIHQLYQSLTMAIGDAVKHIPFRDVCMRDTRGFYDIIAADTTDSEFAALLELNGLDTHLKSMAFIPLRARLFLNAIIDCKMPYSAFTHDEGNWVSGHGESKALRGENDSKQGKLIRALDALQPAKFHWQWVELRLLLNEQALIDKMENHDMSLVDALRSSSPSSERASPSENEKVFIEIILTRLLVRPDAAPLFSEVVHLFGRSLEDSLLMQAKWFLGGMDVLLGRKTVRQRLINIAETKNLSTKTQFWKPWGWSYSGGDPVTNRGEKKNEATFLEEGEVIEEAVESKKCAKGSQIDVEGSNISQQHVTEKAFIKLILPCIDQSSADSRNTFANDLIKQFSTIEQQVKLVTRGISKQTGTASSIEVSTNKSNSRKSIRGASPGLARRTMAPAESVPPSPAALRASMSLRLQFIVRLLPIICADGEPSSRNMRHMLASVILRLLGSRVVHEDVDLSFNFKQLKRDAELVSSIASSEIYRDSLFDRLLLVLHGLLSSCQPSWLRSKTANDFSGFDHEALESFQNELDSMQLPEIIRWRIQAAMPILFPSFRNVISCHTPSVPVGALSALQSSIYIPESCNGTLNAPQRQVASARTANNIPGKAKSMPSLQEYDMEIDPWTLLEDGAGSSLSSSGTIVIGGSDRANLRASSWLKGAVRVRRADLTYTGAVDDGS |
Length | 2251 |
Position | Kinase |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.239 |
Instability index | 48.85 |
Isoelectric point | 8.87 |
Molecular weight | 249178.66 |
Publications | PubMed=25893780
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP13016
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.61| 28| 298| 572| 599| 2
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572- 599 (54.14/30.76) TCDFRD.FRTAPP.HNLKFTGRKDFSQ...IYL
874- 906 (37.47/19.08) TCNKPDmFEGAPGyEDRKRVKRQKLSEdksLYL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 179.62| 56| 1148| 787| 848| 5
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787- 848 (84.12/72.07) QHNCANTSHVSTNdkKSHSTSGRDGAfqVSGDQWKTLQSSKTFRRDVdlEGLKASISVLLQF
1937- 1992 (95.50/61.56) QTGTASSIEVSTN..KSNSRKSIRGA..SPGLARRTMAPAESVPPSP..AALRASMSLRLQF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 157.63| 50| 1153| 365| 473| 6
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366- 420 (72.25/102.38) QTYVRNLVAIAIRFIREPSpggADLVDNSRRAYTVSALVEmlRYLIQAVPDTFVA
711- 760 (85.38/24.16) QAYVRQLIVSGIIDISRPM...ADLDRRKRHHRILKQLPG..QYMLDILEEARIA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.48| 26| 98| 1324| 1381| 7
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468- 493 (47.33/16.82) SQYQ....SLSFDHVVSTIHKCADNLAKGA
1351- 1380 (41.15/17.43) SNYQpsisSLSFAKRILRIHLICLCLLKEA
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