<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12984
Description |
mediator of RNA polymerase II transcription subunit 33B-like |
Sequence | MAVSIQAKGTTVWDWVLEYTKSAQEKNSDPLLWAVQLGSSLNSAGVSLPSIDLAHLLVSYICWDNHVPIAWKFLEKALTVKFVPPMLVLALLSSRVIPNRKFHPAAYLLYMELLRRHASALKCQISGPNYLKIMKSIDDVLHLSKIFGIQASEPGLVLVEFVFSIVWQLLDASLDDEGLLELTPEKRSIWPIVTQDMEIDNADNFHEKKNDHHDVLYKRNTMMAIEIIGEFLQNKVTSRILLLAQRNIPSHWEAFIQQLRVLSAKSVILRNSKHTTPEAVLQLTSDTHKVLSRKCKTPSQQEFHLLIGSRSLTSASGRCHGTSPSAHWLPIDLFLEDAMDRSEVAATGATERLTGLVKALQAVNSTTWHDTFLGLWIAALRLVQRERDISEGPMPRLDTCLCLLLSISPLAVTNIVEEEKSELIDEIDCSQTTQTKEKQAPGRCHKGLISSLQMLNNYEALLTPPQSVRSVANQAAAKAIMVISGLTVGNGYYECMSSNDMPINCSGNMWHLIVEACIARNLLDTSAYVWPGYVNARPNIPRSVPSQVPGWSSLMKGSPLTPTLVNALIATPASSLAEIEKIYEIATKGSNDEKIYAASILCGASLVRGWNIQEHAILFITSLLLPPVPSDYSESESYLISYAPLLNVLLLGISSADCVQILSLHGMVPILAGMLMPLCEVFGSTAPDVSWTLPTGEELTSHAVFTNAFTLLLRLWRFDHPPVEHVMMGDATPVGSQLSPEYLLLVRNSKVSDFGKSPKDRLKMKRMSKNLNLTLELIFMDSFPKLKGWYRQHNKCIASTLSGLVQGTTVHQIVDALLNMMFSKISRSGQSSGSSSPSTSGADDVSLILNVPAWDILEATPYVLDAALTACAHGRLSPRDLATGLKHLADFLPATLATIVSYFSAEVTRGIWKPVFMNGSDWPSPAENLSIIEQQIKKIIAATGVDVPSLTTGRSSPAMLPLPLAALVSLTITYKLDKASERFLVLIGPALSSLAEGCPWPCMPIIASLWALKVKRWNDFLVFSASRTVFHHSSDAVVQLLRSCFASTLGLSPSTTYSNGGVGALLGHGFGSHFSGGMSPVSPGILYLRVHRSVRDIMFMTEEIVSLLMSSVRDIAGSREKPKNTKFGLRYGQVSLRAAMARVKLAASLGASLVWLSGGLSLVQSLIKETLPSWFISAHSADQDAGEPAGIVAMLGGYALAYFVVLCGTFAWGVDSASPASKRRPKVLGSHLEFLASAVDGKISLGCDYATWRAYVVRFVSLMVGCTQKWILDGNIDVLKRLSYGLIRWNEEELAMALLGLGSVRATTAAAELIIEIGA |
Length | 1319 |
Position | Tail |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.169 |
Instability index | 47.20 |
Isoelectric point | 7.19 |
Molecular weight | 144061.41 |
Publications | PubMed=25893780
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12984
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 325.47| 107| 355| 551| 662| 1
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375- 448 (115.24/65.42) ...........LWIAALRLVQR.....ERDISEGP..MPRLDTCL.CLLLSIS...................PLA...VTNIVEEEKSEL.....IDEIDCSQTTQTKEKQAPGRCHKGL
551- 606 (58.84/36.17) .............................................................WSS.LMKGS..PLTptlVNALIATPASSLAEIEKIYEIATKGSNDEKIYAASILCGASL
607- 660 (63.34/33.77) VRGWNIQEHAILFITSLLLPPV.....PSDYSESESYLISYAPLLNVLLLGISSADCVQ.............................................................
851- 934 (88.05/48.20) VPAWDILEATPYVLDAALTACAhgrlsPRDLATGLKHLADFLPATLATIVSYFSAEVTRgiWKPvFMNGSdwP...........SPAENLSIIEQ.........................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 140.44| 45| 353| 125| 191| 2
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125- 191 (56.51/80.10) IS....GPNYLKIMKSIDDVLHLSkifGIQASepglVLVEfvFSIVWQLLDASLDdeglleltpekrsIWP
483- 531 (83.93/52.76) ISgltvGNGYYECMSSNDMPINCS...GNMWH....LIVE..ACIARNLLDTSAY.............VWP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 133.62| 44| 647| 329| 373| 3
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329- 373 (70.35/58.95) LPIDLFLEDAMDRSEVAATGATERLT.G.......LVKALQAVNSTTWHDtFL
970- 1021 (63.27/47.25) LTITYKLDKASERFLVLIGPALSSLAeGcpwpcmpIIASLWALKVKRWND.FL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 190.89| 58| 71| 698| 757| 5
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698- 757 (93.30/73.19) ELTSHAVFTNAFTLLLRLWRFDHPPVEHVMMG..DATPVgSQLsPEYLLLVRNSKVSDFGKS
772- 831 (97.59/66.77) NLTLELIFMDSFPKLKGWYRQHNKCIASTLSGlvQGTTV.HQI.VDALLNMMFSKISRSGQS
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