Description | probable mediator of RNA polymerase II transcription subunit 26b |
Sequence | MAMKGWAIEQWRGYFRTANSDIFDIIDHAIMVAALDCPKEFRLRRDRIAEKLFTCKLTRCSGCDRVELVLPEYEDDDNPTGCHGSFKREDEEEEDGCGFFEAGGSKESKANSSRDDPLMNQIASNYRYGEAEALTDEIEEESMIVGEVFRIKEILHNCQDEPNSVLFESLRKLQLMDLTVDILEATGIGKAVNRVRKHSSKQIRHLAQTLIDVWKALVDEWVSATKAVAGVTPESMNPSVDEEVDEEEEGLPSPPLDMDALFAQPTAMELSQFFDGMDDDGNPGSSGDFVRNNGRKPSEENRNLSKRKPQTSSEANPALKNDKSQQMKRQEPVTKPNNKPSTTNVGSGKPPKHNIEPKASNESNSLRKPDKMAVPKKPLRSQQDKLKPSDEDAVQQKLEATKRKLQERYQQVENAKRRRTIQVMELHDLPKQGSGHKNPHFKHGNHNRQWANGRR |
Length | 455 |
Position | Unknown |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.976 |
Instability index | 51.51 |
Isoelectric point | 5.80 |
Molecular weight | 51509.03 |
Publications | PubMed=25893780 |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP12979 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 52.94| 16| 16| 337| 352| 1 --------------------------------------------------------------------------- 337- 352 (29.65/18.02) NNKPSTTNVGSG..KPPK 354- 371 (23.29/12.65) NIEPKASNESNSlrKPDK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 125.90| 38| 202| 74| 117| 3 --------------------------------------------------------------------------- 74- 117 (61.37/42.02) EDDDNPtGCHGSFKRED..EEEEDGCGFfeaggSKESKANSSRDDP 278- 317 (64.53/31.10) DDDGNP.GSSGDFVRNNgrKPSEENRNL.....SKRKPQTSSEANP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.23| 14| 18| 373| 387| 4 --------------------------------------------------------------------------- 373- 387 (18.87/16.36) AVPKKpLRSQQDKLK 393- 406 (22.36/13.21) AVQQK.LEATKRKLQ --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GHKNPHFKHGNHNRQWANG 2) LHDLPK 3) SLRKPDKMAVPKKPLRSQ | 435 426 365 | 453 431 382 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab