Description | mediator of RNA polymerase II transcription subunit 12-like |
Sequence | MQRYHAPSCTSAVNNSAIGGASVRDTPRVDSSSLPPNFSLNSRRQSQLAPYKLKCDKEHLNSRLGPPDFHPQTQNCPEETLTRENVQHGYKDTIDGLEDSKEISLTQVQAFTKPVVLKCRDAIRKCLRAINESRAQKRKAGQVYGVPLSGSLLSKPGVFPEQRPCNEDFRKKWIEGLSLQHKPLCSLADQVPQGYKKRPLIEVLIRNNVPLLKATWFIKVTYLNQVRPGSAISSGAPDKTQLSRTELWTKDVIDYLQYLLDEFFSKNNSHSTQHGRDRLPQMHYAGSLQHRSDLAPAIIDGEEPSLHFKWWYVVRLLQWHHAERLVLPSLIIDWVLNQLQEKDLLEILQLLLPIIYGVLETITLCQTYVRNLVGVAIRFIREPSPGGSDLVDNSRRAYTISALVEMLRYLIQATPDTFIALDCFPLPTCVLSHTPSDGGFLSKPSDDAAKKNYSADAYAVRGKGFDSQYHSLSFNHVVSTVEKRADNLAKGATAGYPSQSVAKAVQTLDKALLQGDVIDAYKHIFNDLYDGAVGEGWVAEVNPCLRSSLKWLQTVNLSLICSVFFLCEWATCDYRDFRTAPPSDVKFTGSKDFSQIYLAIQLLKLKMKELQKKLKKERASRKNTSQQNSYSSKDLLGDTHEAKSNGKCLNGRRRNFSDIFDSPGPLHDIIVCWIDQHEGHKGEGSKRLQLFMLELIRSGIFYPQAYVRQLIVSGIVDTNGPMADLNRRKRHQRILKQLPGQFMVNALEEARIAEGSELLEAINVYSNERRLVLQELFFDSYNNTNNSHALAKKLNCHSTSGRDVDSQVSCDKRRTVQASKTFRREVDLEELKASISVLLQFPSSSFCSADSGVDESQGSIKRSIGSTHSKMDSVEGTPGCEDCKRVKRQKLSEDKSSCLQVSSPIPSDDEDTWWVRKGPKNLEGSKVDPLLKSTKQASRGRQKSVRKTQSLAQLAAARIEDSQGASTSHVCDSKISCPHHRTEVENLKPVDGIRTTHHADIISIGRGLKQLRFVEKRVVTIWLLSVVKQLVEESEKSVPKASQYGRPFVAADEKSPLRWKLGEDELSAILYLLDVSCDSASAVKFLLWLLPKAISNPSPAIHSGRNILMVPRNVENYACEVGEAYLLSSLRRYENILIAADLVPEALSATMRHVASFMATNGRITGSGALVFACYLLRRYGSIASVIEWEKNFKGTCDKRLLSELESGRTEGEFGFPHGVPAGTEDPDDYCRQRINVGRLSRVGASMRDMVQRHIDDVLHYILGKERKHFAANAPKSPATEKGGDDYQVAQQIIMALMDCFRQTGGAFQEGDPGLVSSAVSAIVSNVGPTLAKIPDFTSGSTYSNYQPPMNSLNFAKRILHIHLICLCLLKEALGERKSQAFEIALATEAFSALAVAFAPAKSSRGQLLSPDSLDSHTNISNDNSHSSAKATLGRTTKMAAVSALVIGAIIHGVISLERMVSVLRLKEGLDVVQFVRSTKTSSNGNARSVGAFKVDNSVEVYVHLFRLFVGNCRTVCDGLVLELLGEQSVLALSRMQRLLPINLVFPPAYAIFAFMIWKPFILNSNTARSEDIHQLYQSLTMAIGDAIKHRPFRDVCMRDTRGFYDIVAADTIDAEFAAMLELNGLDMHLKSMAFVPLRARLFLNAIIDCKMPNSAFTQDDGNRVSGHSESKALRAETSKLLDKLVCALDTLQPAKFHWQWVELRLLLNEQALIDKIENHDMSLVDAIRSSSPSSERASPSESEKVFIEIILTRLLVRPDAAPLFSEVVHLFGRSLEDSMLMQAKWFLGGLDVLLGRKTVRQRLSNIAENKNLSTKSQFWKPWGWSYSGADPVTNSGEKRKSEVTSLEEGEVIEEGMESKGCVKGSTQVDIEGSGINQQHVTEKAFIELVIPCIDQSSADSHNTFASDLIKQFNTIEQQINSVTRGVSKQTGTATSGIEGPTNKINNRKGIRGGSPGLAKRTPAPVESAPPPSPAALRASMSLRLQFIVRLLPIICADGEPSARSMRNMLASVILRLLGSRVVHEDVDLSSNLAQLKRDMELMPIVASTEMSGDSLFDRLLLVLHGLLSSCKPSWLKSKDAKDFSGFDREAVEGLQNELDSMQLPEMIRWRIQAAMPILFPSFHNTVSCQPPSVPIGALSLLQPSICVPGSYTGTINPPQRQVASARNANNMPGKSKSVLSQENDMEIDPWTLLEYGAGSGPSSSSTAAIGGSDNANLRASSWLKGAVRVRQTDPSYIGAVDDDS |
Length | 2245 |
Position | Kinase |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.280 |
Instability index | 48.20 |
Isoelectric point | 8.57 |
Molecular weight | 248533.72 |
Publications | PubMed=25893780 |
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP12972 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.83| 18| 54| 383| 402| 1 --------------------------------------------------------------------------- 383- 402 (30.05/22.86) PSPGG.....SDlvDNSRRAYTISA 435- 457 (27.78/14.58) PSDGGflskpSD..DAAKKNYSADA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 69.52| 20| 54| 657| 681| 2 --------------------------------------------------------------------------- 657- 681 (32.76/30.16) SDIFDSPGPLHDiivcwIDQHEGHK 713- 732 (36.76/19.96) SGIVDTNGPMAD.....LNRRKRHQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 81.54| 24| 50| 796| 820| 3 --------------------------------------------------------------------------- 796- 820 (39.37/25.78) CHSTSGRDvDSQVSCDKRRTVQASK 847- 870 (42.17/23.52) CSADSGVD.ESQGSIKRSIGSTHSK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 173.99| 57| 610| 1319| 1477| 5 --------------------------------------------------------------------------- 1420- 1477 (87.42/194.90) ISNDNSHSSAKATLGRTTKMAAV..SALVIG........AIIHGVISLERmVSVLRLKEGLDVVQFVR 2023- 2089 (86.57/22.39) VHEDVDLSSNLAQLKRDMELMPIvaSTEMSGdslfdrllLVLHGLLSSCK.PSWLKSKDAKDFSGFDR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 62.74| 18| 55| 1217| 1235| 8 --------------------------------------------------------------------------- 1217- 1235 (33.35/23.60) PHGvPAGTEDPDDY.CRQRI 1275- 1293 (29.39/15.76) PKS.PATEKGGDDYqVAQQI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 201.24| 65| 900| 76| 148| 11 --------------------------------------------------------------------------- 76- 148 (97.38/95.61) CPEETLTRENVQhgykdTIDGLEDSKE...IS....LTQVQAFTKPVVLKCRDAIRKCLraINESRAQKRKAGQvYGVPL 977- 1048 (103.86/75.70) CPHHRTEVENLK.....PVDGIRTTHHadiISigrgLKQLRFVEKRVVTIWLLSVVKQL..VEESEKSVPKASQ.YGRPF --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 70.01| 22| 900| 492| 521| 17 --------------------------------------------------------------------------- 492- 514 (31.91/32.33) ATAGyPSQSVAKAVQTLDKALLQ 2198- 2219 (38.10/16.21) AGSG.PSSSSTAAIGGSDNANLR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IDPWTLLEY 2) SYIGAVD | 2188 2236 | 2196 2242 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab