<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12970
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MATATYPPPPPFYRLYKDYLQNPKSAPEPPPPIEGTYVCFGGNYTTDDVLPSLEDQGVRQLYPKGPNIDFKKELRSLNRELQLHILELADVLVERPSQYARQVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKEADTTLEDIKRRREEARRLLKESLGTLDGQ |
Length | 171 |
Position | Middle |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.683 |
Instability index | 75.24 |
Isoelectric point | 6.98 |
Molecular weight | 19821.40 |
Publications | PubMed=25893780
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP12970
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.65| 10| 19| 7| 16| 1
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7- 16 (24.43/ 9.28) P.PPPPFYRLY
27- 37 (19.23/ 6.25) PePPPPIEGTY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 90.66| 22| 23| 80| 101| 2
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80- 101 (38.16/20.57) ELQLHILEL.......ADVLVE...RPSQYAR
105- 126 (30.44/15.31) EISLIFKNL.......HHLLNS..lRPHQ.AR
127- 158 (22.07/ 9.61) ATLIHILELqiqrrkeADTTLEdikRRREEAR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.53| 14| 22| 41| 54| 3
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41- 54 (24.92/15.36) GGNYTTDDVLPSLE
65- 78 (24.61/15.10) GPNIDFKKELRSLN
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