<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12966
Description |
mediator of RNA polymerase II transcription subunit 33B-like isoform X2 |
Sequence | MAVSVQAASPVWESVLEQTKSAQDKNRDPLLWAVQLSSSLNSAGISLPSIDLAHLLVSHICWDNHVPITWKFLEKALTVKFVPSMLVLALLSTRIMKSVGDVLHLSQIFGVKVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPEKRSIWPTVTQDMEIDSVDNFNEKRSEHHDVLCKGNTTMAIEIIGEFLQNKVTSRILFLARRNMPSHWGTFIQQLRVLAAKSVALRNAKHITPEALLNLTSDMHKVVSRKCKTISQQEFNAVIGSGSLTTSSGQCHGTSPSAHWLPIDLFLEDAMDGSQVAATGAVESLTGLVKALQAVNGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGSDCSPTNQIKEKQATGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGYYECMSINDMPMNCSGNMRHLIVEACISRNLLDTSAYVWPGYVNARANIPRNVPVQVTGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGASLVRGWNIQEHTILFITSLLSPPVPADYSGNESHLISYGPFFNILLVGISPVDCVQIFSLHGLVPLLAGTLMPLCEVFGSTSPNVSWTLPTGEELTSHAVFSNAFTLLLRLWRFNHPPFENAMGDATPVGSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELLFMDSFPKLKSWYRQHQECIASTLSGLVQGTTVHQIVDALLNMMFRKISRGGQSLTSTTSGSSNSPASGAEDVSMRLKVPAWDILEGAPYVLDAALTACAHGRLLPRDLATGLKDLADLLPATLATIVSYLSAEVTRGIWKPVFMNGTDWPSPSANLFMVEQQIKKIIAATGVDVPSLAIGGSSPAMLPLPLAALVSLTITYKLDKASERFIVLIGPALSSLAESCPWPCMPIIASLWAQKVKRWSDFLVFSASRTVFHHNIDAVVQLLRSCFTLIPGLSPSTIYSNGGVGALLGHGFGSHFSGGMSAVAPGILYLRVHRSVRNIMFMTEEIVSLLMSSVRDIANSGLFRENLEKLKKAKFGLRYRQVSLGAATTQVRLAASLGASLVWLSGGLSLVQLLIQETLPSWFLSAHNPDQDGGEPGGLVAMLSGYALAYFVVLCGTLVWGVDSSSPTSKRRPKVLGAHLEFLASAIDGKISLGCEHATWHAYVTGFVSLMVGCTKKWVLDVNVDVLRRLSNGLRQWNEEELAIALLGLGGTEATASAAELIIEIGP |
Length | 1291 |
Position | Tail |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.199 |
Instability index | 45.39 |
Isoelectric point | 6.25 |
Molecular weight | 140036.43 |
Publications | PubMed=25893780
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Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12966
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 300.97| 97| 173| 1010| 1111| 1
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1010- 1111 (153.44/130.50) CFTLIPGL...SPSTIYSNGGVGALLgHGFGSHFSGGMSAvapGILYLRVHRSVRN.IMFM...TEE.IVSLLMSSVRDIANsGLFRENLEKLKKAKFGLRYRQVSLGAA
1179- 1283 (147.53/107.30) CGTLVWGVdssSPTSKRRPKVLGAHL.EFLASAIDGKISL...GCEHATWHAYVTGfVSLMvgcTKKwVLDVNVDVLRRLSN.GLRQWNEEELAIALLGLGGTEATASAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 40.62| 12| 15| 557| 568| 2
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557- 568 (19.96/11.02) ISAASILCGASL
574- 585 (20.66/11.65) IQEHTILFITSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.16| 11| 15| 631| 644| 5
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631- 642 (16.63/13.77) PLLAGTLmPLCE
649- 659 (22.53/ 6.64) PNVSWTL.PTGE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 119.46| 30| 173| 586| 616| 7
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424- 453 (48.14/33.84) LTPPQPVRSVANQAAAKAI.MFVSGLTVGNG
459- 475 (21.89/10.26) SINDMPMNCSGNMRHLI..............
586- 616 (49.43/40.83) LSPPVPADYSGNESHLISYgPFFNILLVGIS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.23| 23| 460| 342| 364| 8
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342- 364 (41.66/26.00) LRLVQRERDISEGPVPRLDTCL..C
813- 837 (35.57/21.08) MRLKVPAWDILEGAPYVLDAALtaC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.91| 28| 599| 283| 315| 11
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283- 315 (44.01/38.00) GT...SPSAhwlpiDLFLEDAMDGSQVAATGA.VESL
885- 916 (40.90/22.59) GTdwpSPSA.....NLFMVEQQIKKIIAATGVdVPSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.05| 11| 16| 701| 711| 13
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701- 711 (19.30/13.77) P.EYLLLVRNSK
719- 730 (16.75/10.89) PkDHMKLKRMSK
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