<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12941
Description |
mediator of RNA polymerase II transcription subunit 33B-like isoform X3 |
Sequence | MKSVDDVLHLSQIFGAQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPEKRSIWPTVTQDMEIDSVDNFNEKRSEHHDVLCKGNTTMAIEIIGGFLQNKVTSRILFLARRNMSSHWGTFLQQLRVLAAKSVALRNAKHITPEALLNLTSDMHKVVSRKCKTISQQELNAVIGSGSLTTSSGQCHGTSPSAHWLPIDLFLEDAMDGSQVAATGAVESLTGLVKALQAVNGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPTNQIKEKQSPGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGYYECMSINDMPMNCSGNMRHLIVEACIARNLLDTSAYVWPGYVNARANIPRNVPVQVIGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGASLVRGWNIQEHTILFITSLLSPPVPADYSGSESHLISYGPFFNILLVGISPVDCVQIFSLHGLVPLLAGTLMPLCEVFGSTSPNVSWTLPTGEELTSHAVFSNAFTLLLRLWRFNHPPFENAMGDATPVGSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSFPKLKSWYRQHQECIASTLTGLVQGTTVHQIVDALLNMMFRKISRGGQSLTSTTSGSSSSPASGAEDVSMRLKVPAWDILEGAPYVLDAALTACAHGRLLPRDLATGLKDLADLLPATLATIVSYLSAEVTRGIWKPVFMNGTDWPSPSANLFMVEEQIKKIIAATGVDIPSLAIGGSSPAMLPLPLAALVSLTITYKLDKASERFIVLIGPALSSLAESCPWPCMPIIASLWAQKVKRWSDFLVFSASRTVFHHNIDAVVQLLRSCFTSIPGLSPSTIYSNGGVGALLGHGFGSHFSGGMSAVAPGILYLRVHRSVRNIMFMTEEIVSLLMSSVRDIANSGLFRENLEKLKKAKFGLRYRQVSLGAATTRVRFAASLGASLVWLSGGLSLVQLLIQETLPSWFLSAHTPDQDGGEPGGLVAMLSGYALAYFVVLCGTLAWGVDSSSPTSKRRPKVLGAHLEFLASAIDGKISLGCEYATWHAYVTGFVSLMVGCTKKWVLDVNVDVLRRLSNGLRQWNEEELAIALLGLGGAEATASAAELIIEIGP |
Length | 1196 |
Position | Tail |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.193 |
Instability index | 47.38 |
Isoelectric point | 6.11 |
Molecular weight | 129495.22 |
Publications | PubMed=25893780
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12941
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 118.20| 38| 124| 69| 110| 1
---------------------------------------------------------------------------
69- 110 (61.51/50.51) VDNFNEKRSEHHDVLCKGnttmAIEIIGGF...LQ..NKVTSRILFL
198- 240 (56.69/36.55) IDLFLEDAMDGSQVAATG....AVESLTGLvkaLQavNGTTWHDTFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 300.72| 97| 173| 915| 1016| 2
---------------------------------------------------------------------------
915- 1016 (153.59/117.84) CFTSIPGL...SPSTIYSNGGVGALLgHGFGSHFSGGMSAvapGILYLRVHRSVRN.IMFM...TEE.IVSLLMSSVRDIANsGLFRENLEKLKKAKFGLRYRQVSLGAA
1084- 1188 (147.13/96.51) CGTLAWGVdssSPTSKRRPKVLGAHL.EFLASAIDGKISL...GCEYATWHAYVTGfVSLMvgcTKKwVLDVNVDVLRRLSN.GLRQWNEEELAIALLGLGGAEATASAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 287.16| 91| 173| 424| 521| 3
---------------------------------------------------------------------------
424- 521 (136.68/118.66) GSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGA.SLVRGWNIQEHTilFITSLLSPPVpadySGSESHLIsYGPFFNILLVGIS
601- 692 (150.48/107.44) GSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSfPKLKSWYRQHQE..CIASTLTGLV....QGTTVHQI.VDALLNMMFRKIS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.24| 23| 468| 247| 269| 7
---------------------------------------------------------------------------
247- 269 (41.66/23.06) LRLVQRERDISEGPVPRLDTCL..C
718- 742 (35.58/18.68) MRLKVPAWDILEGAPYVLDAALtaC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.91| 28| 67| 743| 772| 10
---------------------------------------------------------------------------
743- 772 (39.31/27.86) AHGRLLPrDLATGLKDLAdLLPATLATIVS
813- 840 (49.60/26.25) ATGVDIP.SLAIGGSSPA.MLPLPLAALVS
---------------------------------------------------------------------------
|