<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12940
Description |
mediator of RNA polymerase II transcription subunit 33B-like isoform X2 |
Sequence | MAVSVQAASPVWESVLELTKSAQDKNRDPLLWAVQLSSSLNSAGISLPSIDLAHLLVSHICWDNHVPITWKFLEKALTVKFVPSMLVLALLSTRVIPNRKFHPAAYRLYMELLRRHAFSLQCQINGPNYQKSSHWGTFLQQLRVLAAKSVALRNAKHITPEALLNLTSDMHKVVSRKCKTISQQELNAVIGSGSLTTSSGQCHGTSPSAHWLPIDLFLEDAMDGSQVAATGAVESLTGLVKALQAVNGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPTNQIKEKQSPGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGYYECMSINDMPMNCSGNMRHLIVEACIARNLLDTSAYVWPGYVNARANIPRNVPVQVIGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGASLVRGWNIQEHTILFITSLLSPPVPADYSGSESHLISYGPFFNILLVGISPVDCVQIFSLHGLVPLLAGTLMPLCEVFGSTSPNVSWTLPTGEELTSHAVFSNAFTLLLRLWRFNHPPFENAMGDATPVGSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSFPKLKSWYRQHQECIASTLTGLVQGTTVHQIVDALLNMMFRKISRGGQSLTSTTSGSSSSPASGAEDVSMRLKVPAWDILEGAPYVLDAALTACAHGRLLPRDLATGLKDLADLLPATLATIVSYLSAEVTRGIWKPVFMNGTDWPSPSANLFMVEEQIKKIIAATGVDIPSLAIGGSSPAMLPLPLAALVSLTITYKLDKASERFIVLIGPALSSLAESCPWPCMPIIASLWAQKVKRWSDFLVFSASRTVFHHNIDAVVQLLRSCFTSIPGLSPSTIYSNGGVGALLGHGFGSHFSGGMSAVAPGILYLRVHRSVRNIMFMTEEIVSLLMSSVRDIANSGLFRENLEKLKKAKFGLRYRQVSLGAATTRVRFAASLGASLVWLSGGLSLVQLLIQETLPSWFLSAHTPDQDGGEPGGLVAMLSGYALAYFVVLCGTLAWGVDSSSPTSKRRPKVLGAHLEFLASAIDGKISLGCEYATWHAYVTGFVSLMVGCTKKWVLDVNVDVLRRLSNGLRQWNEEELAIALLGLGGAEATASAAELIIEIGP |
Length | 1212 |
Position | Tail |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.205 |
Instability index | 46.51 |
Isoelectric point | 7.33 |
Molecular weight | 131240.57 |
Publications | PubMed=25893780
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12940
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 205.84| 74| 173| 931| 1032| 1
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81- 121 (38.99/ 8.53) ............................................FVPSMLVLALLST.RVIPNRKFhpaaYRLYMELLRRHAFSLQ
180- 220 (55.18/21.41) TI.SQQELNAVIGSGSLTTSSGQCHGTSPSAHWLPID......LFLED......................................
942- 1023 (111.67/116.71) TIySNGGVGALLGHGFGSHFSGGMSAVAPGILYLRVHrsvrniMFMTEEIVSLLMSSvRDIANSGL....FRENLEKLKKAKFGLR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 287.16| 91| 173| 440| 537| 2
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440- 537 (136.68/115.95) GSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGA.SLVRGWNIQEHTilFITSLLSPPVpadySGSESHLIsYGPFFNILLVGIS
617- 708 (150.48/104.98) GSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSfPKLKSWYRQHQE..CIASTLTGLV....QGTTVHQI.VDALLNMMFRKIS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.24| 23| 468| 263| 285| 3
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263- 285 (41.66/24.09) LRLVQRERDISEGPVPRLDTCL..C
734- 758 (35.58/19.54) MRLKVPAWDILEGAPYVLDAALtaC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.91| 28| 67| 759| 788| 8
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759- 788 (39.31/32.31) AHGRLLPrDLATGLKDLAdLLPATLATIVS
829- 856 (49.60/30.44) ATGVDIP.SLAIGGSSPA.MLPLPLAALVS
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