<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12932
Description |
mediator of RNA polymerase II transcription subunit 33B-like isoform X4 |
Sequence | MSNQWTKLSKIFGAQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPEKRSIWPTVTQDMEIDSVDNFNEKRSEHHDVLCKGNTTMAIEIIGGFLQNKVTSRILFLARRNMSSHWGTFLQQLRVLAAKSVALRNAKHITPEALLNLTSDMHKVVSRKCKTISQQELNAVIGSGSLTTSSGQCHGTSPSAHWLPIDLFLEDAMDGSQVAATGAVESLTGLVKALQAVNGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPTNQIKEKQSPGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGYYECMSINDMPMNCSGNMRHLIVEACIARNLLDTSAYVWPGYVNARANIPRNVPVQVIGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGASLVRGWNIQEHTILFITSLLSPPVPADYSGSESHLISYGPFFNILLVGISPVDCVQIFSLHGLVPLLAGTLMPLCEVFGSTSPNVSWTLPTGEELTSHAVFSNAFTLLLRLWRFNHPPFENAMGDATPVGSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSFPKLKSWYRQHQECIASTLTGLVQGTTVHQIVDALLNMMFRKISRGGQSLTSTTSGSSSSPASGAEDVSMRLKVPAWDILEGAPYVLDAALTACAHGRLLPRDLATGLKDLADLLPATLATIVSYLSAEVTRGIWKPVFMNGTDWPSPSANLFMVEEQIKKIIAATGVDIPSLAIGGSSPAMLPLPLAALVSLTITYKLDKASERFIVLIGPALSSLAESCPWPCMPIIASLWAQKVKRWSDFLVFSASRTVFHHNIDAVVQLLRSCFTSIPGLSPSTIYSNGGVGALLGHGFGSHFSGGMSAVAPGILYLRVHRSVRNIMFMTEEIVSLLMSSVRDIANSGLFRENLEKLKKAKFGLRYRQVSLGAATTRVRFAASLGASLVWLSGGLSLVQLLIQETLPSWFLSAHTPDQDGGEPGGLVAMLSGYALAYFVVLCGTLAWGVDSSSPTSKRRPKVLGAHLEFLASAIDGKISLGCEYATWHAYVTGFVSLMVGCTKKWVLDVNVDVLRRLSNGLRQWNEEELAIALLGLGGAEATASAAELIIEIGP |
Length | 1194 |
Position | Tail |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.184 |
Instability index | 47.44 |
Isoelectric point | 6.26 |
Molecular weight | 129346.08 |
Publications | PubMed=25893780
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP12932
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 118.20| 38| 124| 67| 108| 1
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67- 108 (61.51/51.24) VDNFNEKRSEHHDVLCKGnttmAIEIIGGF...LQ..NKVTSRILFL
196- 238 (56.69/37.03) IDLFLEDAMDGSQVAATG....AVESLTGLvkaLQavNGTTWHDTFL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 300.72| 97| 173| 913| 1014| 2
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913- 1014 (153.59/96.31) CFTSIPGL...SPSTIYSNGGVGALLgHGFGSHFSGGMSAvapGILYLRVHRSVRN.IMFM...TEE.IVSLLMSSVRDIANsGLFRENLEKLKKAKFGLRYRQVSLGAA
1082- 1186 (147.13/78.86) CGTLAWGVdssSPTSKRRPKVLGAHL.EFLASAIDGKISL...GCEYATWHAYVTGfVSLMvgcTKKwVLDVNVDVLRRLSN.GLRQWNEEELAIALLGLGGAEATASAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 287.16| 91| 173| 422| 519| 3
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422- 519 (136.68/102.73) GSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGA.SLVRGWNIQEHTilFITSLLSPPVpadySGSESHLIsYGPFFNILLVGIS
599- 690 (150.48/93.02) GSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSfPKLKSWYRQHQE..CIASTLTGLV....QGTTVHQI.VDALLNMMFRKIS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.24| 23| 468| 245| 267| 7
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245- 267 (41.66/25.41) LRLVQRERDISEGPVPRLDTCL..C
716- 740 (35.58/20.62) MRLKVPAWDILEGAPYVLDAALtaC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.91| 28| 67| 741| 770| 10
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741- 770 (39.31/31.26) AHGRLLPrDLATGLKDLAdLLPATLATIVS
811- 838 (49.60/29.46) ATGVDIP.SLAIGGSSPA.MLPLPLAALVS
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