<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12931
Description |
mediator of RNA polymerase II transcription subunit 33B-like isoform X1 |
Sequence | MAVSVQAASPVWESVLELTKSAQDKNRDPLLWAVQLSSSLNSAGISLPSIDLAHLLVSHICWDNHVPITWKFLEKALTVKFVPSMLVLALLSTRVIPNRKFHPAAYRLYMELLRRHAFSLQCQINGPNYQKIMKSVDDVLHLSQIFGAQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPEKRSIWPTVTQDMEIDSVDNFNEKRSEHHDVLCKGNTTMAIEIIGGFLQNKVTSRILFLARRNMSSHWGTFLQQLRVLAAKSVALRNAKHITPEALLNLTSDMHKVVSRKCKTISQQELNAVIGSGSLTTSSGQCHGTSPSAHWLPIDLFLEDAMDGSQVAATGAVESLTGLVKALQAVNGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPTNQIKEKQSPGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGYYECMSINDMPMNCSGNMRHLIVEACIARNLLDTSAYVWPGYVNARANIPRNVPVQVIGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGASLVRGWNIQEHTILFITSLLSPPVPADYSGSESHLISYGPFFNILLVGISPVDCVQIFSLHGLVPLLAGTLMPLCEVFGSTSPNVSWTLPTGEELTSHAVFSNAFTLLLRLWRFNHPPFENAMGDATPVGSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSFPKLKSWYRQHQECIASTLTGLVQGTTVHQIVDALLNMMFRKISRGGQSLTSTTSGSSSSPASGAEDVSMRLKVPAWDILEGAPYVLDAALTACAHGRLLPRDLATGLKDLADLLPATLATIVSYLSAEVTRGIWKPVFMNGTDWPSPSANLFMVEEQIKKIIAATGVDIPSLAIGGSSPAMLPLPLAALVSLTITYKLDKASERFIVLIGPALSSLAESCPWPCMPIIASLWAQKVKRWSDFLVFSASRTVFHHNIDAVVQLLRSCFTSIPGLSPSTIYSNGGVGALLGHGFGSHFSGGMSAVAPGILYLRVHRSVRNIMFMTEEIVSLLMSSVRDIANSGLFRENLEKLKKAKFGLRYRQVSLGAATTRVRFAASLGASLVWLSGGLSLVQLLIQETLPSWFLSAHTPDQDGGEPGGLVAMLSGYALAYFVVLCGTLAWGVDSSSPTSKRRPKVLGAHLEFLASAIDGKISLGCEYATWHAYVTGFVSLMVGCTKKWVLDVNVDVLRRLSNGLRQWNEEELAIALLGLGGAEATASAAELIIEIGP |
Length | 1328 |
Position | Tail |
Organism | Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.190 |
Instability index | 46.77 |
Isoelectric point | 6.49 |
Molecular weight | 144381.52 |
Publications | PubMed=25893780
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12931
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 300.72| 97| 173| 1047| 1148| 1
---------------------------------------------------------------------------
1047- 1148 (153.59/137.34) CFTSIPGL...SPSTIYSNGGVGALLgHGFGSHFSGGMSAvapGILYLRVHRSVRN.IMFM...TEE.IVSLLMSSVRDIANsGLFRENLEKLKKAKFGLRYRQVSLGAA
1216- 1320 (147.13/112.49) CGTLAWGVdssSPTSKRRPKVLGAHL.EFLASAIDGKISL...GCEYATWHAYVTGfVSLMvgcTKKwVLDVNVDVLRRLSN.GLRQWNEEELAIALLGLGGAEATASAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 287.16| 91| 173| 556| 653| 2
---------------------------------------------------------------------------
556- 653 (136.68/101.85) GSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILCGA.SLVRGWNIQEHTilFITSLLSPPVpadySGSESHLIsYGPFFNILLVGIS
733- 824 (150.48/92.20) GSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSfPKLKSWYRQHQE..CIASTLTGLV....QGTTVHQI.VDALLNMMFRKIS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.24| 23| 460| 379| 401| 3
---------------------------------------------------------------------------
379- 401 (41.66/21.46) LRLVQRERDISEGPVPRLDTCL..C
850- 874 (35.58/17.38) MRLKVPAWDILEGAPYVLDAALtaC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.79| 28| 599| 320| 352| 11
---------------------------------------------------------------------------
320- 352 (43.52/42.94) GT...SPSAhwlpiDLFLEDAMDGSQVAATGA.VESL
922- 953 (40.27/25.30) GTdwpSPSA.....NLFMVEEQIKKIIAATGVdIPSL
---------------------------------------------------------------------------
|