<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12781
Description |
mediator of RNA polymerase II transcription subunit 33A-like |
Sequence | MVAESTRFEDRVLETVKCCQERKDPPLVWAMEVSKCVREAGFSLPSPELGVVLVSSLCFSNNNPYLWKFLDQAISSGLLSSLQVLALLTSRVIPHRRTQPEAYRLYLELLSRYALFLAPVGTNPCREKIVISVDDALELSKNYGFHVVEFGQAVVLFLFTVIINLIDSTMDDWGLQPASVGKISGLFGGGEHQDMDIDSKGNQNDKRREHCELLKKTNAFMTMEVLGKLTENRKVMVLLRLVHLNMAEKFNGLLQRIQFLESHKSVSPNIKSSSQILVRLSANIKRGLDLEYQLNKRQLFGVMIDIGSCSSASSYNFGAGRAACWVPFDIYVETAMDGRQLPATSAVDVLTDLTKTLQVINRASWQETFQALWVSALRLVQRERDPLEGPIPHLDARFCVLLCVVPLAIVHVLEDEREGTSSGNMGTNCNHGMGGTDYASRRQGLVACLKVLGQFSGLLSPPLSIASAANSAASKAANFISNFRNGNDGFSGSGHGDNCVKAGGNMLHLIVEACIARKLIDTSAYFWPGYVSTSSTSLSDSSPVQVSPWSAFMDGANLAGPLRNALIATPASSLAEIEKLYHIAINGSEEERSAAAKILCGASLSRGWNIQEHVVHFVVRLLSPPIPPNFSGPGSHLIDYMSMLNAILFGVSSSDTIHILSLHGLVPEVAASLMPLCEAFGSLVPTSCQKSSTGDEISAYTTFSCAFLLLLRLWKFYRPPHEHCITEHGGTTGSELTLEYLLLLRNSRIAPHNSKPLDNTKKVSNLPEPSSAYPIYIDFYPKLRSWYCQNKACIASTLSGLCSGSPVHQIANKVLSMICRKMTKGGTVSGNASTPSSNSASGSPVSAGEDAYQRPMLPAWDILEATPFVLEAVLTACAHGRLSSRDLTTGLSDLVDFLPASLAAIVTYFSAEITRGIWKLVSMNGIEWPSPAANLLSIESEIKEILAAAGINAPNCYTEGPPVMLPLPMAAMLSLTLTFKLDKNLEYIHTVAGSALDNCASSCPWPSMPIIGALWAQKARRWHDFIVVSCSRSAFKQDQAAVAQLLRSCFTSFLGSPHVTVSPMTAQRGVNGLLGSKISACGIRPSIAPGFLYLRTCRTIHNVQFVNDVILGLVSKSAQESAARWACANSTRLKSSRVSLASATSWAKEVATLGASLLCVAGGVQLVQVLYKETIPTWLLSTREEKPTGVGPVSRILEGYAVAYLVFLSGSFVWGVGATSSTRAHSRRARIVGVHVDFVAGALEGNISLGCDPTTWKAYVSCFVGLVVHFAPAWIQEVRQEILRKLANGLRGWHECELALALLERGGIATMGYVAELIHGIC |
Length | 1322 |
Position | Tail |
Organism | Nelumbo nucifera (Sacred lotus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Proteales> Nelumbonaceae> Nelumbo.
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Aromaticity | 0.08 |
Grand average of hydropathy | 0.132 |
Instability index | 43.63 |
Isoelectric point | 8.03 |
Molecular weight | 143287.51 |
Publications | PubMed=23663246
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP12781
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 139.89| 43| 76| 324| 372| 1
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324- 372 (61.39/63.42) CWVPFDIyVETAMDGRQlpATSAVDVLTDLTKTLQVINRASWQetfQAL
403- 445 (78.50/55.55) CVVPLAI.VHVLEDERE..GTSSGNMGTNCNHGMGGTDYASRR...QGL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 150.62| 38| 76| 749| 786| 2
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691- 714 (24.95/11.26) ...............SSTGDEISAYTTFsCAFLLLLRLW
749- 786 (69.00/45.52) IAPHNSKPLDNTKKVSNLPEPSSAYPIY.IDFYPKLRSW
828- 860 (56.67/35.93) VSGNASTPSSNSASGSPVSAGEDAYQ......RPMLPAW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 217.26| 69| 684| 525| 608| 4
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528- 604 (105.43/97.61) PGYVSTSSTSLSDSSPVQVS.PWSAFMDGANLAgplrNALIATPASSlaeiEKLYHIAINGSEEERSAAAKILCGA..SL
612- 683 (111.83/63.31) EHVVHFVVRLLSPPIPPNFSgPGSHLIDYMSML....NAILFGVSSS....DTIHILSLHGLVPEVAASLMPLCEAfgSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 362.93| 120| 1095| 10| 138| 6
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10- 138 (191.08/120.07) DRVLETV.KCCQErkdPPLVWAMEVSKCVREAGFSLPSP.....ELGVVLVSSLCFSNNNPYLWKFLDQAISSGLLSSLQVLAlltSRVIPHRRTQpEAYRL.YLELLSryALFLAPVGTNPC......REKIV.ISVD...DALE
1108- 1244 (171.85/88.80) DVILGLVsKSAQE...SAARWACANSTRLKSSRVSLASAtswakEVATLGASLLCVAGGVQLVQVLYKETIPTWLLSTREEKP...TGVGPVSRIL.EGYAVaYLVFLS..GSFVWGVGATSStrahsrRARIVgVHVDfvaGALE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.45| 25| 514| 209| 233| 8
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209- 233 (44.46/27.16) EHC..ELLKKTNAFMTMEVLGKLTENR
722- 748 (39.99/23.76) EHCitEHGGTTGSELTLEYLLLLRNSR
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