<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12771
Description |
ATP-dependent DNA helicase |
Sequence | MEDDILEELLNVETELQEVQDQIKILLDRQEKLYARQSELKILLEECNASGSPADGGASVTVENWSGPFGWDSEADDIRFNVFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAILRDGVALVVSPLLSLIQDQVMGLSALGIPAYMLTSTTSKEDEKFIYRALEKGEGELKILYVTPEKVSKSKRFMSKLEKCHHGGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPSVPVVALTATATKKVQADLMEMLHISKCIKFVSTVNRPNLFYMVRDKSSVGKVVVDEIADFIRSSYPNNESGIVYCFSRKECEQVAEELCQRGISAGFYHADMDVGAREKVHLRWSSNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYYRPGDVPRQSSMVFYENAGLQNLYDMVRYCQSKRGCRRSAFFHHFAEPLQDCNGMCDNCAFGTELNEVDVTRQAKAIVSLLQEIQEKDQRATMLQLVDKVKVKYKESGSDLKKEETEQLIIQLILDRVLACS |
Length | 546 |
Position | Unknown |
Organism | Nelumbo nucifera (Sacred lotus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Proteales> Nelumbonaceae> Nelumbo.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.232 |
Instability index | 46.75 |
Isoelectric point | 5.79 |
Molecular weight | 61307.59 |
Publications | PubMed=23663246
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Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-KW
DNA helicase activity GO:0003678 IEA:UniProtKB-EC
hydrolase activity GO:0016787 IEA:UniProtKB-KW
nucleic acid binding GO:0003676 IEA:InterPro
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GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP12771
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.32| 14| 15| 15| 28| 1
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15- 28 (22.86/21.22) ELQEVQDQIKILLD
32- 45 (22.46/20.69) KLYARQSELKILLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 148.90| 46| 138| 268| 335| 2
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268- 328 (62.69/117.17) SKCIkfvstvnrpnLFYMVRDKSSVGKVVVDEIADfIRSSYpnneSGIVYCFSRKECEQVA
409- 454 (86.21/71.77) SECV..........LYYRPGDVPRQSSMVFYENAG.LQNLY....DMVRYCQSKRGCRRSA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 127.66| 37| 299| 69| 106| 4
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69- 106 (60.89/46.20) FGWDSEADDIRFnVFGISTYRANQREIINAVMSGRDVL
371- 407 (66.77/45.84) FGMGINKPDVRF.VIHHSLSKSMETYYQESGRAGRDGL
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