<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12738
Description |
mediator of RNA polymerase II transcription subunit 12-like isoform X2 |
Sequence | MQRYSATSCGGVSSTAVGGASARDSARADPSFSSSNFSLNTRRPLQLNPYKLKCDKEPLNCRLGPPDFYPQSPNCPEETLTREYVQSGYKETIEGLEEARELILSQLTTFTKPVIIKCKEAIRKRLRAINDSRAQKRKAGQVYGVPLSGSLLLKPGVFPEQRACGEDSRKKWIEGLSQQHKRLRALADHVPHGFRRKALFEVLIRHNVPLLRATWFIKVTYLNQVRPVSANVSSGATDKTQLNRSDLWTKDIIEYLQYLLDEYISKDGSLGRDQSPQMLLAGSVHKGDSTPTLTDDEEPSLHFKWWYMVRILQWHHAEGLVLPSHIIEWVLSQLQDKESLETLQLLLPIIYAMIETIVLSQTYVRNLVEVAVRSIQEPSSGGSDLVDNSRRAYTASAVIEMLRYLIVAVPDTFVALECFPLAPSVISGVTNGRSFFSKASEDSEKTHYGPGELITMYGDRRQDAHNQFLSFDYLVSSIQKRADNLGKAVSPGLQGHGVAKAVQALDKALTLGDLRGAYNFLFENLCDGNIEEVWIAEVSPCLYSSMKWMGMVSFSFICSLFFLFEWATCDFRDCRTSLPLDLKFTGRKDFSQVYIAVLLLKMKMEDMCNSIQSKNGSTLGAGIFSGGTTGENVFVSKNKSKSLGGRIDSSDIFQSPGPVHDIIVCWIDQHDVGKGEGFKRLQLLIIELIRSGIFYPPAYVRQLIVSGIMDRSETLVDLDRRKRHYHVLKQLPGAYMLDSLEEAQIADVPVLEEALHVYANERRLLLLGLLGDHTSHSKNGNDVSFFSPKQKDNPSSGRNAASPSLEHLKNLRSASNPLSGRDAKMKVQVSEVKAAISMLLHLPSSYSAASDTRSDESQWSCKRSIGPISNKMDVTEGTPGCEECRRSKKQKLSEDRSSYTHGFLQNPSDDEDSWWVRKGPKSMESFKVDPPLKSTKHASRGRQKIVRKTQSLAQLAAARIEGSQGASTSHVCDNKISCPHHRTGTEGDVSKPSDGMRTAHLGDVVSIGKALKQLRLLEKRAITVWLITSVRQLIEGFEKSISKVGQCTGPLPSSIDDKNSVRWKLTEDELSAILYLMDISFDLVSAVKFLLWLLPKIPSTTNSNIHSGRSILMLPKNTECYSCEVGEAFLLSSIRRYENIIVAADLLHETLSATMHRAATVMTTNGRASGSAAFVYARNLLKKYCNVPSVAKWEKNFRATSDQRLLAELESGRALDGEFGFPLAVPAGVEDLDDYFRQKISGRLSRPTPGMKEIVQKHIDEAMHYFYSKERKLFTAGAPKGPSLEKCDDGYQMAQQIVLGLMECIRQNNNAPQEVDPFVVASAVSAIVGNVVSALVKMPDFTTSSNYPNFPSPINSLNCARRIVHIHIACLCLLKEALGERQSRVFEIALATEASSAVATALAPGKGSRSQFQLSPEAHDSNSSLSNEMLNTAKVFLGRATKAAAAVSSLVVGAVVHGAASLERMISVLRLKEGLDIIQFVRSARTSSNGISRSIGALKVDNLIEVYLHWFRLLVGNCRMVSDGLVVELLGEPYILALSRMQRMLPLSLVLPPAYSIFALVIWRPYILNSNIVIREDVQLHQSLASTINDVIRHQPFRDVCLRDTHAFYDILASDVGDSEFAAMLEMHGTDKHMKTMAFVPLRARLFLNAILDCKLPHSMSSHDDGTRVSGHGELKVQRAESETKLQDQLLHVLDTLQPAKFHWQWVELRFLLNEQALIEKIDTHNMSLAEAIRSLSPSADNSVLSENESNFNEIILTRLLVRPDASPLYSEVVHLLGKSLEESLLLQTKWFLGGNDVLFGRKSIRQRLVNIAQIRGLSTKIQFWKPWGWPHSAADLAVIRGEKKKFEVASLEEGEVVEEGVDFKRSGRLTSQTFDSEGFNCGQQYATERSLVELVLPCIDRSSSESRNAFASDLIKQMNGIEQQINAVTRGTGKQAGAVPSGIEGGTNKGSSRKGIRGGSPGLGRRSTGPTDSALPSSAALRASMWLRLKLLLRLFPLIYADRNMRLLLSSAILRLLGSRVVHEDADLSYPTQRSSPSKREVESPIEPSAVISLDLCGDSLFDWLLAMLHGLLSSCKPSWLKPKSVSKSTVKSPRDISVFDREAVESLQNELDRMQLPESIRWRLQAAMPILPPCSSFSISCQMPAVSTAALALLQSSFSVPMFQHGTSNLPQKNQVPSARTPASIPGKSKPLPSQDQDMEIDPWTLLEDGTSSGPSSNNCSLGATADHSNLKACSWLRGAVRVRRTDLTYIGAVDDDS |
Length | 2260 |
Position | Kinase |
Organism | Nelumbo nucifera (Sacred lotus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Proteales> Nelumbonaceae> Nelumbo.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.227 |
Instability index | 53.98 |
Isoelectric point | 8.55 |
Molecular weight | 250200.21 |
Publications | PubMed=23663246
|
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12738
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 345.74| 110| 345| 326| 442| 1
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209- 297 (109.92/73.42) .......................PL.LRA...TWFIKVTYL.N....QVRPVsANVSSGATDKTQLNRSDLWTKDIIEYLQYLL....DEYISKDgslGRDQSPQmLLAGsVHKGDSTPTLTDDE
326- 442 (169.54/138.57) IIEWV.LSQLQDKESLETLQLLlPI.IYAMIETIVLSQTYVRNLVevAVRSI.QEPSSGGSDLVDNSRRAYTASAVIEMLRYLIvavpDTFVALE...CFPLAPS.VISG.VTNGRSFFSKASED
663- 721 (66.29/39.69) IVCWIdQHDVGKGEGFKRLQLL...iIELIRSGIFYPPAYVRQLI...VSGI.MDRSET...LVDLDRR........................................................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 458.10| 146| 345| 843| 1007| 2
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846- 1007 (236.79/206.11) YSAASDTRSDESQWSCKRSIGPISNKMDVtegtP.GCEECRRSKKQKLSEDRSSYTHG...FLQNPSDDEDSWWVRK........GPKSmesfkvdPPLKSTKHASRGRQKIV.......RKTQSLAQLAAARIEGSqgaSTSHVCDNKIS....CPHHRTGTE.GDVSKPSDGMRTAHlgDVVSI
1197- 1366 (221.31/148.73) FRATSDQRLLAELESGRALDGEFGFPLAV....PaGVEDLDDYFRQKISGRLSRPTPGmkeIVQKHIDEAMHYFYSKerklftagAPKG.......PSLEKCDDGYQMAQQIVlglmeciRQNNNAPQEVDPFVVAS...AVSAIVGNVVSalvkMPDFTTSSNyPNFPSPINSLNCAR..RIVHI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.02| 43| 343| 1424| 1480| 3
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1424- 1480 (58.51/76.73) SLSNEMLNTAKVFLGRATkaaaavsslvvgaVVHGAASL.ERMISVLRLKeGLDI.IQF
1780- 1824 (65.51/50.39) SLEESLLLQTKWFLGGND.............VLFGRKSIrQRLVNIAQIR.GLSTkIQF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 63.69| 15| 17| 478| 492| 4
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459- 472 (18.47/ 9.64) .DRRQDAHNQFLSFD
478- 492 (24.26/15.23) IQKRADNLGKAVSPG
498- 512 (20.96/12.05) VAKAVQALDKALTLG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.40| 22| 208| 513| 542| 5
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513- 542 (29.19/41.99) DLRGAYnflfenLCDgNIEEVWIAEVsPCL
730- 751 (40.22/25.07) QLPGAY......MLD.SLEEAQIADV.PVL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.74| 14| 17| 772| 785| 6
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772- 785 (25.43/15.87) DHTSHSKNGNDVSF
792- 805 (24.31/14.79) DNPSSGRNAASPSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 213.06| 66| 989| 1065| 1135| 9
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1065- 1135 (100.05/81.76) LTEDELsaILYLMDISFDLVSAVKfLLWLLPKipSTTNSNIHSGRSILMLPKNT.ECYSCEVGEAFLLSSIR
2057- 2123 (113.02/73.90) LCGDSL..FDWLLAMLHGLLSSCK.PSWLKPK..SVSKSTVKSPRDISVFDREAvESLQNELDRMQLPESIR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.25| 16| 17| 27| 42| 11
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27- 42 (27.00/16.00) RADP.SFSSSNFSLNTR
46- 62 (25.25/14.43) QLNPyKLKCDKEPLNCR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.45| 15| 17| 69| 85| 12
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69- 85 (24.97/21.23) YPQSPNCPEEtlTREYV
89- 103 (24.49/13.72) YKETIEGLEE..ARELI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.72| 19| 360| 1645| 1665| 13
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1645- 1665 (30.81/25.60) RLFL.NAILdcKLPHSMSSHDD
2007- 2026 (27.91/15.07) RLLLsSAIL..RLLGSRVVHED
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 115.34| 36| 143| 1551| 1588| 15
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1551- 1588 (54.49/48.50) LPPAYSIFALVIWRpYILNSNIVIrEDVQLH.QSLASTI
1697- 1733 (60.85/42.68) LQPAKFHWQWVELR.FLLNEQALI.EKIDTHnMSLAEAI
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