Description | mediator of RNA polymerase II transcription subunit 19a-like |
Sequence | MDPDSKSFGRGPRELTGAVDLISHFKLLPHHEFFCKRSLPLSISDAHYLHNVVGDTEIRKGEGMQLDQLIQDTSLSRETSSRIQPFDLDVLGEAFQLREAAPVVLPPSEKGIPTVAGKSKSESKDKDKKHKKHRDKDKEKDKEHKKHKHRHKDRSKDKDKEKNRDKSGHHDSGADHSKKHHEKKRKHDGEDLNDVHKHKRSKHKSSKIDEIGAIKVAG |
Length | 218 |
Position | Head |
Organism | Nicotiana sylvestris (Wood tobacco) (South American tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae> Nicotiana. |
Aromaticity | 0.03 |
Grand average of hydropathy | -1.368 |
Instability index | 38.37 |
Isoelectric point | 9.50 |
Molecular weight | 24881.66 |
Publications | PubMed=23773524 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP12641 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 50.37| 15| 15| 129| 143| 1 --------------------------------------------------------------------------- 129- 143 (27.55/ 9.38) KHK.KHRDKDKEKDKE 146- 161 (22.81/ 6.53) KHKhRHKDRSKDKDKE --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) HSKKHHEKKRKHDGEDLNDVHKHKRSKHKSSKIDEIGAIKVA 2) KDKDKKHKKHRDKDKEKDKEHKKHKHRHKDRSKDKDKEK | 176 124 | 217 162 |
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