<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12604
Description |
U-box domain-containing protein 33 isoform X4 |
Sequence | MIVGTKFNIDQLDVHQVRTYHEKERQDMHKILEKYVLICGRAGVRADKLVVEMDSIEKGIVELVSQRGIGKLVMGAAANKCYSKKMTDLRSKKAIYVRLQAPTFCCIWFVCKGNLVYTRESKSERPNTDSVSPSIPVSPENDTVLRSRSVTEGYNEQVGLRGPFNEYRRVASDNHRIIFSGPTSGGTLRANFPSMSSDRSPSVASRFSSSSYGEMVGDSPTISLARTEGNDTAIDSSTLHHFIPGHHQPSSPSIQAESLNDEPAGSMNDELLDRLEQYVAEAEDARREAFEESIKRRKAEKDAIEARRRAKASETIYADELRQRRDIEEALAKGKEEANQMKSKLNKMLADLQAAQAQTSSLEHQLLNSDTTVQELEQKMFSAVDLLQKYRKERDELQVERDDALNIAEALRKQHSNGSSTTSAFVLFAEFYFHEIEEATRRFDPALKIGEGGYGSIYRGLLRHTHVAIKMLHPHSSQGPSEFQQEVNILSKLRHPNIVTLIGACPEAWALVYEYLPNGSLEDRLTCKDNTPPLSWQTRIRVASELCSALIFLHSCTARGIIHGDLKPANILLDANFVSKLSDFGICRVLSEDEFSEKSTSLCYRTDPKGTFAYLDPEFLDTGELTPKSDVYSFGIILLRLLTGRPALGIKNEVQYALDKGNLKDLLDPTAGDWPFVQAKQLAHLAMNCCEKNGRLRPELSSEVWKVLEPMRASCGASSFRMGSEERCEIPSYFICPIFQETMQDPVVAADGFTYEAEALRGWLDSGHDTSPMTNLALSNTNLVPNHALRSAIQEWLQQH |
Length | 800 |
Position | Tail |
Organism | Nicotiana sylvestris (Wood tobacco) (South American tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.455 |
Instability index | 49.81 |
Isoelectric point | 5.89 |
Molecular weight | 89614.22 |
Publications | PubMed=23773524
|
Function
Annotated function |
Functions as an E3 ubiquitin ligase.
ECO:0000256 ARBA:ARBA00003861
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GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-UniRule
protein kinase activity GO:0004672 IEA:InterPro
ubiquitin-protein transferase activity GO:0004842 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP12604
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 140.18| 42| 87| 480| 521| 1
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480- 521 (73.75/50.57) PSEFQQEVNILSKLRHPNIVTLIGA...CPEAWALVYEYLPNGSL
568- 612 (66.43/44.80) PANILLDANFVSKLSDFGICRVLSEdefSEKSTSLCYRTDPKGTF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 186.73| 48| 49| 187| 235| 2
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133- 177 (52.44/29.05) ......PSIpvSPENDTVL.RSRSVTEGYNEQVGlRGPFNEYRRVASDNHRI
187- 234 (81.20/56.13) TLRANFPSM..SSDRSPSV.ASRFSSSSYGEMVG.DSPTISLARTEGNDTAI
238- 276 (53.09/32.63) TLHHFIPGH..HQPSSPSIqAESLNDEPAGSM.N.DEL...LDRLE......
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 158.08| 46| 92| 279| 325| 3
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279- 319 (52.73/35.60) ...........VAEAEDARREAFEESIKRRKAEKDAIEARRR..AKASETIYAD
320- 370 (55.89/40.43) ELRQRrdieeaLAKGKEEANQ.MKSKLNKMLADLQAAQAQTS..SLEHQLLNSD
375- 424 (49.45/33.21) ELEQK..mfsaVDLLQKYRKERDELQVERDDALNIA.EALRKqhSNGSSTTSA.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.88| 22| 24| 27| 50| 4
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27- 50 (33.17/30.73) DMHKILEKYVLICGRAGVraDKLV
52- 73 (35.71/25.53) EMDSIEKGIVELVSQRGI..GKLV
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