Description | pre-mRNA-processing protein 40C-like isoform X2 |
Sequence | MASPAWLPQEMQSSSSQTSGMSLATGEPTTSSSTPNADSTQEAVQGKFIPPPGYSAGRASFSYVNASVPSGSSQQSSSSPVIPSTSSGSSASLQPPIPGQSANVGSSFSYNISHADNNFSRGLQFSTSPLRPVSPNQLVDVKNSSPAASLQPPLPLVSTRLSSFIPGSAAPAASPLSGSNLSFNGSPQMVQTDQTMKPNRRVDIAHEMGAMTSPPSVMQSFSQAGHMSSGSSTAAFPTSHLGSPNIRMPHAPQFQVPAGVPRSPVTPGPPGLGPVIPSSSNVTATASPGGPSLSLRPNGPPVPVLANPPVQQQIYSPYLSASPMAPTQGPWLQPSPVTTMLRPPFPSHPAGFAVPFPLSATGAPRSSATLPDTRPPGVASVATPPGVPTTATQSIPALGLQPELPPGVDSAKHVNDADTIEGAPTSEQLETWTAHRTETGAIYYYNSLTGESTYEKPAGFSGEPAKVAAQPTPVSWEKLAGTDWALVTTNDGQKYYYNTKTKLSSWQIPNDVTELKKKHEADALQAQSTSMPNANALTEKGSSPISLSIPAVNTGGRDATTLRSSVVPGSSALDLVKKKLMDAGATAAASSPTPASSGVISSELNGSEALESTARAPQKENSKDKSKEANDNGNMSESSSDSEDDESVPTKEDCIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARKALFEHYVKTRADEERKEKRAAQKAAVEGFKHLLEEAKEVYLVT |
Length | 739 |
Position | Unknown |
Organism | Nicotiana sylvestris (Wood tobacco) (South American tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae> Nicotiana. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.467 |
Instability index | 61.99 |
Isoelectric point | 6.30 |
Molecular weight | 77251.07 |
Publications | PubMed=23773524 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP12602 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 8| 424.44| 54| 54| 53| 106| 1 --------------------------------------------------------------------------- 2- 53 (33.38/ 6.18) .......ASPA.WLPQEMQSSS.SQ..TSGMSLATgePTT............SSSTpnADSTQeavqgkfiPP..PG.......... 54- 106 (87.71/29.35) .YS.AGRASFS.YVNASVPSGS.SQ..QSSSSPVI..PST............SSGS..SASLQ........PPI.PG.QSAN..VGS 107- 163 (46.44/11.75) ........SFS.Y.NISHADNNfSRglQFSTSPLR..PVS....pnqlvdvkNSSP..AASLQ........PPL.PL.VSTR..LSS 167- 219 (49.80/13.18) GSA.AP........AASPLSGS.NL..SFNGSPQM..VQTdqtmkpnrrvdiAHEM..GAMTS........PP........S..VMQ 220- 260 (50.38/13.43) SFSqAGHMS..................SGSSTAAF..PTS............HLGS..PNIRM........PHA.PQ.FQVP..AGV 264- 312 (56.23/15.92) PVT.PGPPGLG.PV...IPSSS.NV..TATASP....................GGP..SLSLR.....pngPPV.P..VLANppVQQ 314- 354 (51.37/13.85) ........IYSpYLSAS.PMAP.TQ..GPWLQPS...PVT............T.......MLR........PPF.PS.HPAG..FAV 360- 411 (49.13/12.89) ATG.APRSSAT.LPDTRPPGVA.S....VATPPGV..PTT............ATQSipALGLQ........PELpPGvDSA...... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 151.89| 45| 46| 523| 568| 2 --------------------------------------------------------------------------- 469- 509 (32.03/11.70) ...AQPT..............PVSweklagtdWALVTTND..GQKyyynTKTKLSSWQIP 523- 568 (71.45/38.95) ALQAQSTSMPNANAlTEKGSSPIS........LSIPAVNT..GGR....DATTLRSSVVP 572- 612 (48.40/21.53) ALDLVKKKLMDAGA.TAAASSPTP........ASSGVISSelNGS....EA..LES.... --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IYSPYL 2) LVKKKLM 3) MASPAWL 4) RASFSYV 5) VQGKFIPPPGY | 314 575 1 58 44 | 319 581 7 64 54 |
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