<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12553
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPATGAAGIGMPPRGPGQSLGGMGGLGTMGQPMPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVALQQQQQQQQQQQFQQQQAALQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRMAQLQLQQQQQQQQQQALQAQTPIQQPPMQQPQPPPSQALPQQLQQMHHPQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQTLPGQMLYAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHVRARFPPTTAVSAVPSSSIPLGRQPMAQVGQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRKLEEDERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA |
Length | 754 |
Position | Tail |
Organism | Tarsius syrichta (Philippine tarsier) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Tarsiiformes> Tarsiidae>
Carlito.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.684 |
Instability index | 85.70 |
Isoelectric point | 9.71 |
Molecular weight | 82759.23 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP12553
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 98.53| 18| 19| 172| 189| 1
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163- 181 (32.81/ 6.34) QQQQQQ.QqqFQQQQAALQQ
248- 265 (33.01/ 6.44) QQQQQQQQ..ALQAQTPIQQ
290- 306 (32.72/ 6.30) QHHQPPPQ..PQQPPVA.QN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 78.94| 28| 47| 270| 316| 4
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270- 316 (42.28/12.58) QpqPPPSQALPQQLQQMHHPqhhqpppqpqqppvaqnQPSQLPPQSQ
407- 434 (36.67/ 6.19) S..AVPSSSIPLGRQPMAQV.................GQSSLPMLSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 94.93| 20| 34| 82| 105| 6
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86- 105 (39.62/24.00) QSLTGGPATGAAGIGMPPRG
108- 124 (28.88/ 7.97) QSLGGMGGLGTMGQPMP...
126- 140 (26.43/ 9.03) ...SGQPPPGTS..GMAPHG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.91| 21| 34| 470| 490| 8
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460- 480 (37.61/11.65) PSSQPNSNVSSGPAPSPSSF.L
481- 502 (34.29/ 9.95) PSPSPQPSQSPVTARTPQNFsV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.62| 29| 35| 532| 562| 10
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532- 562 (40.72/32.88) LDKLKQLSKYIePLRRMiNKID.KNEDRKKDL
569- 598 (46.90/28.48) LDILTDPSKRC.PLKTL.QKCEiALEKLKNDM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 187.85| 45| 46| 645| 690| 11
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599- 643 (63.12/30.01) ..AVP....TPP.PPPVPPTKQQYLCQPL.LDAVLANIRSPVfnHSLYRTFVP
645- 690 (70.25/37.90) MTAIH....GPPiTAPVVCTRKRKLEEDE.RQSIPSVLQGEV..ARLDPKFLV
692- 735 (54.48/24.82) LDPSHcsnnG...TVHLIC....KLDANPfLQSVHRCMTSRL..LQLPDKHSV
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