Description | probable mediator of RNA polymerase II transcription subunit 26b isoform X1 |
Sequence | MAKNTGTLNKWRDYFETANSDIFNVIEYAVMVAAVDYPKEFKLRRDRIAELLFTCKVIRCFGCDKVELAIPNAANDDDKVFVSEFGGCDVKESKSSRGDDQIGMNVNQKISNYSYDEAEALTDEIEQDSKTVGEVLRIKEIIDNFHDESDSDIYECLRRLQLMALSVETLKATEIGKSVNALRKHSSNNIRHLARTLVEDWKVMVEAWVNATTAFTENTPESMKASVVDEEEEGLPSPPLDDLAFISTQTTSMEFSQFFDGMDDDGNIQNTGEFNKNHENGRKDNPVRKQQFAESVTAAPKDRKVEKPKKQTSVVTPNKPFGGDSGPGRPIKPTFERKINNDEMKLLQKYDKGTIRPRHVPIQQNRLKCPDEDPDRVKLEATKRKLQERYQEAEKAKKQRTVQVMELNEIPKQGLRKQGPGHKNSHVRPGNHNRHWANGHR |
Length | 441 |
Position | Unknown |
Organism | Nicotiana sylvestris (Wood tobacco) (South American tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae> Nicotiana. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.889 |
Instability index | 41.62 |
Isoelectric point | 6.27 |
Molecular weight | 50272.85 |
Publications | PubMed=23773524 |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP12545 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 59.10| 18| 19| 295| 312| 1 --------------------------------------------------------------------------- 283- 300 (28.81/14.75) KDNPVRKQQFAESVTAAP 301- 318 (30.29/15.82) KDRKVEKPKKQTSVVTPN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 68.35| 18| 19| 240| 257| 2 --------------------------------------------------------------------------- 214- 226 (14.70/ 6.57) .........AFTENTPESMKAS 239- 256 (32.43/23.17) P....LDDLAFISTQTTSMEFS 257- 275 (21.22/12.68) QffdgMDDDGNI..QNTG.EFN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 53.23| 16| 22| 62| 80| 3 --------------------------------------------------------------------------- 62- 80 (24.28/25.51) GCDKVElaiPNAANDDDKV 87- 102 (28.95/20.51) GCDVKE...SKSSRGDDQI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 37.27| 13| 21| 126| 139| 5 --------------------------------------------------------------------------- 126- 139 (17.62/17.47) EQDSkTVGEVL.RIK 148- 161 (19.65/13.33) ESDS.DIYECLrRLQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.58| 14| 28| 167| 181| 7 --------------------------------------------------------------------------- 167- 181 (17.94/13.66) VETLKATeIGKSVNA 198- 211 (26.64/15.81) VEDWKVM.VEAWVNA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EFSQF 2) GHKNSHVRPGNHNRHWANGHR 3) GRPIKPTFERKINNDEMKLLQKY 4) KQGLRK | 254 421 328 412 | 258 441 350 417 |
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