<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12420

Description Uncharacterized protein
SequenceMEMTLRSIDRYTNYSQLYESWDGFFDGFSDPSVSLRYLCEWTFRDPLSSQDHRVFVASRLVADCHDSILEGSLDVGSQNQVHTDFARFLFDVLDKYILHQPHGCEGQFRLYMFFSQLEQLQVFSIQKYIQRLVARGDLEESSSLFPKYESFLHGYPLHCADAGHGRTLADNVNGDPSSSSSDGGHIRDVLEYITRIDTERRVRDALLYQTVKGQIISRLPRMFAHGDCVDTTRDPPVRDYTPDPILAMPDLLLTSNLVLLPPLWRTRLSLWLKQSVVHFIVKAQEIGINNWKTVSTPGNSIMTDHQLAFIIFVFESTCDYQSLLEVILWLINKTTERSIYRSIVFALERHQCIFHAMSCAQLIFDTLFEKHQAIRKRGTGLDPHILGHLSSLLSHGLCEAEADVVKMLESDRAIPLKGGASKDVPAEFRDLRDVKDDRQSISNAVSSLIWRFQGKQEALAKLFKYSVMLLQRQSTLMPGAGFRRRVSLTVEVLREIADRNQSLNAYISDYYRDTYLVSKPLTTTLPGLELLITVDSGPSVWSLSFIVQLVASRVCSLQRFLDDFVIPTITKAKSNSVLLNTASFSNLVSNLVYLLSILFISTESLELHPNIALSLQHYQYLETLRLTDMRTSTCLSRVFQLLQSLCFIRSRLMSNTTSIRNASQDQLISGINTLSTHLLERPGWFKQACASDRSWLSFDLSRAFVDAKRQFPQDSVALDYVLQCTHVVFKALWDDDSFDGFSNTPVEAPFDISAFEISFGRIVRLSTVRNCDRAEYLMSLTLELLHLHQSLHASGAISVTLTSYLASAEGAAASRHDLAESYSKCWDSLVNVCFQEISKRECIDLYRLLPKMRWEFLKRLVVRSQQLMESVHSILPATTTTNVASTYSTSISGTAASTPPDGVVDMEILVLDIVAIRRFGEFVSQIGVCMCHRLREVRKAKASGKGAAKQAEDAYLGDISSLAAFILRDLMWFQENVKSFDLMVDTQISLGQAQRGTSTTHSAMSGFPPATSAIQDQVLLTHVQEILVARLTLVKTLAPVIIDNPTHFQIVLLLQSLVRLLTSKLVTHMSETSRLFQITLDVVSWLMEDIPKSLNKGIFTWLCKSRQELTLPPPAGDRVDRILPFLDHNRHVSDLVTRHSPGGLLPRDMSLTTSASASSTPIWKSAQLSGSATSAGAQSVTISPNSTPHSLDIANNAQPVDLKGAVALPASRNRVDRYHFLPWKWLEDPGDVAVQQRRPAPSMCWASTSILSPLNNAPISFNVFGARVLHPSETAYLQLHSHGWISQGPSHQKHYCRSRSAIAVPESGVVPSAGPLPFVEIISPTPDTTLPLPSAATVIDNPDATLPKLGMTHSGDSQTAMEIDADLSLVPAGGAAVAAALSNSNTAAGPKEKRKSMDSVTSSPKQSKRRR
Length1411
PositionKinase
OrganismBatrachochytrium salamandrivorans
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Chytridiomycota> Chytridiomycota incertae sedis> Chytridiomycetes> Rhizophydiales> Rhizophydiales incertae sedis> Batrachochytrium.
Aromaticity0.08
Grand average of hydropathy-0.074
Instability index47.88
Isoelectric point6.76
Molecular weight157276.87
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP12420
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     152.93|      45|     151|     968|    1013|       2
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  968- 1013 (76.42/54.24)	RDLMWFQENVKSFDLmVDTQISLGQAQRGTSTTHSA.MSGFPPATSA
 1121- 1166 (76.51/49.31)	RILPFLDHNRHVSDL.VTRHSPGGLLPRDMSLTTSAsASSTPIWKSA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     348.11|     125|     153|     516|     667|       3
---------------------------------------------------------------------------
  512-  651 (181.84/167.25)	RDTYLvS..KPLTTTL...PG.LELLITVDSGpsvWsLSFivQLVASRVCSLQRFLD.....DFVIP...TITKAksnsvLLNTASFSNLVSNLV.............................YLLSilfISTESLELHPNI....ALSLQHYQYL...ETLRLTDMRTSTCLSRVFQLLQSLCF..IRSR
  664-  840 (166.27/98.64)	QDQLI.SgiNTLSTHLlerPGwFKQACASDRS...W.LSF..DLSRAFVDAKRQFPQdsvalDYVLQcthVVFKA.....LWDDDSFDGFSNTPVeapfdisafeisfgrivrlstvrncdraeYLMS...LTLELLHLHQSLhasgAISVTLTSYLasaEGAAASRHDLAESYSKCWDSLVNVCFqeISKR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.71|      27|     157|      40|      66|       4
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   40-   66 (51.36/35.76)	EWTFRDPLSSQDHRVFVASRLV.....ADCHD
  199-  230 (42.35/28.08)	ERRVRDALLYQTVKGQIISRLPrmfahGDCVD
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.36|      38|     157|    1168|    1210|       5
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 1169- 1209 (58.05/37.01)	SGSATSAGAQSVT..ISPnsTPH.SLDIANNAQPVDLKGAvALP
 1307- 1347 (61.31/23.87)	SGVVPSAGPLPFVeiISP..TPDtTLPLPSAATVIDNPDA.TLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.59|      26|      60|      74|     103|       7
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   74-  103 (43.41/30.04)	DVGSQNQVHTDFARFLFDvldkYILH...QPHG
  137-  165 (43.18/21.88)	DLEESSSLFPKYESFLHG....YPLHcadAGHG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.93|      40|      60|     395|     434|       9
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  395-  434 (67.54/48.97)	HGLCEAEADVVK...MLESDRAIPLKG.GASKDVPAEFRDLRDV
  453-  496 (56.39/39.51)	QGKQEALAKLFKysvMLLQRQSTLMPGaGFRRRVSLTVEVLREI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP12420 with Med12 domain of Kingdom Fungi
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