<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12406
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MPGVVMMDGGASHFQSTNHDRSNGPRTNGAQGSPNGLVNHVGNQSALGTNTMPNGNTDGSADAGSSRSPAPVTSRMNDLPDEIQHITQGFIPLRLLLCRLAQQTQNELGDEIMALAKMPLPSSVMNGNGVGADASVDDNSPENLNKKVRLLNFVQEKHGEWVKALIIVNWSRKAEPVSKLIDLMHHINKTRAVYQASLDYMINIRRDLTYARIPNPDLRTALQVLSTGQAPWMPELNYIQPPQITPEEQLRWIENLNTLLSIRLNLDEHENIPEQFQNFEIQSGRITFKVPREFEVDLTIADEDPEKQFWFIDFRFAFQPAPSELTDRLREVLELKVNEALQKDGLPGCYKFLHEFVLTHKITEYYRQAMDLSRGRWVDMLAVERLRRAMAIHYWSGRRSDGPQSYLIMGVSSGKDSSSIAGQRNSSRLTLRWFRDGTEVKDVQFPLDEESISTEALLNRVIGKHTEHILRGFHNVMKSQGRYVEHEASLGLNIVDGRPEESALTMQLSHEQCLTIKVAPITGMLLAMPPSKGNFDLQSQLNKEVRRPVTDQVALLERFRCSFVEDELNRRGKSRGWSVCNRPPVKPEEARQFLGIRGTYQLIWLKRRGLPDGWYIMVGQSLNGDQWWLTEIIERSDSNKIMAHARLPLSPSIPRYSDKFFAELTFFSSAMMSQIGILGAMHKERMKYAVQDRINPLLPPNMKVPSIHVRLSEILGRHHPHVSKNISSWAFDTVEINLKTIENRLPQSMDPAAGPGSRGSNEGIAPLASEQHRYNIVVDARVKVADPSRFGPLRGNVERDVAFNERLGVFAFSIEAAVGSSILDTLAHRLQALSRLAGSIDAIRQSPQDVQCEEITLNNVKFSYTDRARSTNAEAQQNSHRWTASLDLQTENIKLILDPGNPQLRAAEQFDKLINSAEGFKGVPWFLSTTLPIHRALSSVEHAWEALAMTNQCRVNISVISLDCYTIQYTLNLAKDVSRCLTLFVKLQSYNAVPQWHVYREETGPQRQPDDEFQKILQKVWLSGERPWRRLGPSVAADATDGIEALVKATDEAIRPLAVKSPSISKQPQPKMAAQKNVGQTKSVAASKPRPPQQTGLAGKVVISLDD |
Length | 1107 |
Position | Tail |
Organism | Rosellinia necatrix (White root-rot fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Xylariomycetidae> Xylariales> Xylariaceae> Rosellinia.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.431 |
Instability index | 54.31 |
Isoelectric point | 7.97 |
Molecular weight | 124434.06 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12406
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.21| 14| 17| 223| 236| 2
---------------------------------------------------------------------------
223- 236 (26.09/16.15) QVLSTGQAPWMPEL
243- 256 (25.12/15.26) QITPEEQLRWIENL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 125.06| 41| 52| 414| 457| 3
---------------------------------------------------------------------------
414- 457 (60.94/47.98) GKDSSSI.AGQRNSSRLTLRWFRD....GTEVKDVQfPldEESISTEAL
463- 508 (64.13/39.35) GKHTEHIlRGFHNVMKSQGRYVEHeaslGLNIVDGR.P..EESALTMQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.18| 23| 54| 327| 350| 4
---------------------------------------------------------------------------
327- 350 (35.73/26.94) DRLREVLELKVNEALQKDGlPGCY
384- 406 (43.44/28.43) ERLRRAMAIHYWSGRRSDG.PQSY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 135.60| 41| 59| 974| 1015| 5
---------------------------------------------------------------------------
974- 1015 (69.42/53.33) AKDVSRCLTLFVKlQSYNAVPQWHVYREETGPQRQPDDEFQK
1036- 1076 (66.18/45.81) AADATDGIEALVK.ATDEAIRPLAVKSPSISKQPQPKMAAQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.57| 10| 34| 568| 577| 6
---------------------------------------------------------------------------
568- 577 (21.03/ 9.60) LNRRGKSRGW
605- 614 (21.54/ 9.99) LKRRGLPDGW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.17| 12| 16| 29| 42| 13
---------------------------------------------------------------------------
29- 42 (19.56/15.26) GAQGSPNGlvNHVG
48- 59 (24.61/13.01) GTNTMPNG..NTDG
---------------------------------------------------------------------------
|