<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12367
Description |
mediator of RNA polymerase II transcription subunit 33A |
Sequence | MEVSMDCSLWDSVLELTTVSQEKGGDPLVWAIQVSSCLSSAGVSLPSLELANFLVSHICWENNLPIVWKFLEKALVLKIVSPIIVFPLLSSRVIQNRRLRPAAFRLYMELLRRHIFTLKIHVNMQSYKKIVSFLDSVLYLTEIFGMHADEPGVLVVEIIFSIVWQLLDASLDDEGLLQLTPEKKSRWPTKPEDMEIDGCINDMERNEHKERLKNLNTLLAIELIAQFLQNKVTARILYLVRQNMPVHWGAFVQRIQLLAGNSSALQSSSVISPEALLQLASDAHNLIKTNSLQELYVRSTSRSLATCAGLCFGSSRSSLWLPLDLFLEDAMDGSQVNATSAIEIITDLVKSLQAINATTWHETFLGLWMAALRLVQRERDPIEGPMPRLDTRLCMLFSIITLVVADLIEEEESEACDEIESSIGRHMKKQVAGTRRRDIVSCLQSLGDYQSLLTPPQAIITAANQAAAKAMMFRSGINTNSSYFECINMKDLPINCSGNLYHLIVEACIARNLLDTSAYFWPGYVNGRMNQLPHSVPTQVPGWSSFMKGAPLTQAMINALVSAPASSLAELEKIFEMAVKGADDEKIAAGTILCGASLINGWNIQEHTVNFITRLLSPPVPTDYSGKDSHLIGYAPTLNVLLVGIAPVDCVQIFSLHGMVPQLAASLMTICEVFGSCVPNISWTLTTGEDISVHAVFSNAFALLLKLWRFNHPPIEYRVGDVPPVGCQLTPEYLLLMRNSHLVSSGDMLKDPNRRRLAAVASSSSPNPIFVDSFPKLRVWYRQHLACIASTLSGLVNGTLVCQTVDLLLNMMFKKINGGSQSLISITSGSSSSSGTGSEDTSPRPKLPAWDILEAVPFVVDAALTACAHGRLSPRELCTGLKDLADFLPASLATIVSYFSAEVTRGVWKPVFMNGTDWPSPAANLSNVEEQIKKILAATGVDVPSLAAGGSSPAILPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLNNNHAVIQLLKSCFMTTLGLNSSSISSNGGIGALLGHGFGSHFYGGISPVAPGILYLRVYRSIRDIMFLREEIVSLLMQSISDIAHSELPRQRLDKLKIPKNGKKFGNVSLAKTMTRVKLAALLGASLLWLSGGSGLVQSLIKETLPSWFLSIHSSNQGGEGGLVPMLKGYALAYFAVLCGAFASGVDSLSMASKRRPKIIGRHVEFIASVLDGKISLGCDPATWHAYVSGFVSLMVGCTPTWVFEVDGELLKRLSKGLSQWHEEDLALALLSIGGVGTMGSAAELIMEASS |
Length | 1319 |
Position | Tail |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.226 |
Instability index | 47.82 |
Isoelectric point | 6.55 |
Molecular weight | 143791.34 |
Publications | PubMed=24807620
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12367
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 148.15| 43| 155| 618| 692| 1
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493- 538 (76.43/33.82) PINCSGNLYHLIVEACIARNLL......DTSAYFWpgyVNGRMNQLPHSVPT
621- 669 (71.72/78.98) PTDYSGKDSHLIGYAPTLNVLLvgiapvDCVQIFS...LHGMVPQLAASLMT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 152.13| 49| 156| 1001| 1061| 4
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1001- 1054 (74.32/67.74) IVASLWTQKAKRWsdFLVFSASRTvflNNNHAVIQLLKS.........CFMTTLGLNSSSISS
1164- 1221 (77.80/42.51) LVQSLIKETLPSW..FLSIHSSNQ...GGEGGLVPMLKGyalayfavlCGAFASGVDSLSMAS
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