Description | mediator of RNA polymerase II transcription subunit 19a-like isoform X1 |
Sequence | MDSDSKNFGRGPRELTGARDLISHFKLLPHYEFFCKRSLPLSISDTHYLHNVVGDREIRKGEGMQLDQLTQDTSFSREIKSCIRPFDLDVLREAFQLRETAPVDLSPSEKGIPTIAGKSKSEMKDKEKKHKKHKDKDKEKDKEHKKHKHRHKDRSKEKKKDKSGHHDPGAEHSKKHEKKRKHDEEDLNGVHKHKKSKHKSSKIDEIGAIKVAV |
Length | 213 |
Position | Head |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae> Nicotiana. |
Aromaticity | 0.04 |
Grand average of hydropathy | -1.402 |
Instability index | 39.95 |
Isoelectric point | 9.62 |
Molecular weight | 24710.76 |
Publications | PubMed=24807620 |
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro transcription factor binding GO:0008134 IBA:GO_Central |
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP12350 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 76.70| 19| 19| 126| 144| 1 --------------------------------------------------------------------------- 140- 161 (25.34/ 6.76) KDKEHkkhKH..RHKDRSKEKKKD 162- 181 (25.72/ 6.97) KSGHH..dPG..AEHSKKHEKKRK 182- 202 (25.64/ 6.93) HDEED...LNgvHKHKKSKHKSSK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KIDEIGA 2) SEMKDKEKKHKKHKDKDKEKDKEHKKHKHRHKDRSKEKKKDKSGHHDPGAEHSKKHEKKRKHDEEDLNGVHKHKKSK | 202 121 | 208 197 |
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