<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12328
Description |
mediator of RNA polymerase II transcription subunit 23-like isoform X1 |
Sequence | MNTAKRNWRNKTQKRVTALNRELPPRNEQFVLDFGQLQSQFADQEQLRAVAESVLISLVIQCSSHAPHAEFLLFAICSLSSIGYINWDTFLPSLLSSVSSTEISASQGNQLSGAVSSANLTQSGLLPSSTAVASTSNFHSSNPASPLPTVHGIGSPVQSTAEPSSSAALSPMKSSDVNGTSQQSIAKVNLLTRDNAASSLRQICCKIILTGLDSSLKPGTHAEVFHHMLNWLINWDQKLHGVDEFDSAKYWKPDKALIEWLHSCLDVIWLLVENDKCHIPFYELLRSGLQFLENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTPRLLPQATASSSGEAVANMRYSPITYPSVLGEPLHGEDLAASIQKGSLDWERALRILKHALRNSPSPDWWRRVLLVAPCHRLHAQAPTPGAVFTSEMVCEAAIERIVELLKLTNSEINCWQEWLIFSDIFFFLVKSGCVDFVEFVDKLVLRLQEGDQQILRTNHVTWLLAQIIRVELVMNALNTDSRKVETTRKILSFHKEEKSSDPNNPQSILLDFISSCQNLRIWTLNTATREYLNNEQLQKGKQIDEWWRQVNKGERMMDYMKLDDRSVGMFWVVSYTMAQPACETVMHWLTSAGVTELLPGPTLQSNERLVVMREVSPLPISLLSGFSTNLCLKLAYQMEESMFSGQAVPSIAVVETYCRLMLISPHSLFRSLLTVTSPLFPPNIPSLVFNSLACHCIFFRTTFIPLSQ |
Length | 746 |
Position | Tail |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.068 |
Instability index | 51.50 |
Isoelectric point | 6.16 |
Molecular weight | 83862.37 |
Publications | PubMed=24807620
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
transcription regulator complex GO:0005667 IBA:GO_Central
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GO - Biological Function | |
GO - Biological Process | positive regulation of gene expression GO:0010628 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP12328
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 369.90| 119| 179| 148| 326| 1
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148- 284 (175.07/222.61) PTvhgIGSP...VQSTAePSSSAALSPMKSSDVngtSQQSIAKVNLLTRDNAASSLR.QICCKIILTGLDSSLKPGTHAEVFHHMLnwLINWDQKLHGVDEFDSAKY..........................WKpdkaliEWLHSClDVIWLLVENDkChIPFYEL
329- 477 (194.83/113.67) PT...FGTPrllPQATA.SSSGEAVANMRYSPI...TYPSVLGEPLHGEDLAASIQKgSLDWERALRILKHALRNSPSPDWWRRVL..LVAPCHRLHAQAPTPGAVFtsemvceaaierivellkltnseincWQ......EWLIFS.DIFFFLVKSG.C.VDFVEF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.16| 12| 15| 112| 123| 2
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112- 123 (20.00/11.62) SGAV.SSANLTQS
129- 141 (16.16/ 8.04) STAVaSTSNFHSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 97.17| 32| 513| 1| 34| 4
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1- 34 (51.14/49.07) MNTAKRnwRNKTQKRVTALNRE...LPPRNEQ.FVLDF
515- 550 (46.03/34.52) LNTDSR..KVETTRKILSFHKEeksSDPNNPQsILLDF
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