<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12291

Description U-box domain-containing protein 35-like isoform X2
SequenceMFCKLRLIKREKMWLPNNKGSPANRRGNGTGVVAIAIDKDKGSQYAIKWATDNLVNRGQTLVLVHVVTKPTSSSYGNCGGVHVVDGNLSAHGQNLEKQTKELFLTFHCFCTRKDVRCLDVILEDSDVTKALTEYVSSAAIQNLVLGASRHGFIRRLKVTDIPSTVSKGAPDFCTVYVISKSKISSVKNASRPAPMASPLYKQIQQLEEQVNSGGITPTARTRAIHAGSVVDRSQRRSFISDESKKIGSPFDRRGILPSRIFSDLSEADTDLSFVSSGRPSTDHTSSMLYHDGMDSGRISQISTSSDSSFGSERLGARGSELSSFNDFSSSSFETDDGEAEMRRLKMELQRTMDLYSTACKEALTAKQKSEELNVWRMEEEKRLEEARLAEEAAKLAAEKERDKCKVAMETAEAAQRLAELEAKRRVDAEMQALKEAEQKEKAFMNLGQGDFRYRRYSIEEIEEATHFFTDSLKIGEGGYGPVYKCYLDHTPVAIKILRPDAAQGRSQFQQEVEVLSRMRHPNMVLLLGACPEYGCLVYEYMANGSLEERLMRCGDKRSLSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKISDVGLSRLVPPSTTEEVTQYRITSAAGTFCYIDPEYQQTGMLGVKSDVYSFGILLLQLVTAKPAMGITHYVSQCIETGEFKEVLDPSVPDWPIEEALTFAKLALQCAELRRKDRPDLGKVVLPELNRLRALTEENMGQLLIGGSASPSPSHSQASISQEISSEPQVHSGFSTKSVSNSSASQEKHSGSGDE
Length797
PositionTail
OrganismNicotiana tabacum (Common tobacco)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae> Nicotiana.
Aromaticity0.07
Grand average of hydropathy-0.432
Instability index50.00
Isoelectric point6.56
Molecular weight88352.03
Publications
PubMed=24807620

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP12291
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.89|      22|      28|     387|     413|       1
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  387-  412 (31.22/29.79)	RLAEeaakLAAEKERDKCKVAMETAE
  416-  437 (35.67/18.84)	RLAE....LEAKRRVDAEMQALKEAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     101.50|      28|      29|     320|     347|       2
---------------------------------------------------------------------------
  263-  294 (34.93/18.51)	DLSEADtdlSFVSSGRPSTDHTSSMlYHDGMD
  320-  347 (47.57/27.85)	ELSSFN...DFSSSSFETDDGEAEM.RRLKME
  353-  370 (19.00/ 6.74)	.........DLYSTACK....EALT.AKQKSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.13|      36|     524|     191|     255|       3
---------------------------------------------------------------------------
  192-  228 (59.80/52.02)	PAPMAS..PLYKQIQQlEEQVNSG....GITPTARTRAIHAGS
  753-  794 (52.33/14.47)	PSPSHSqaSISQEISS.EPQVHSGfstkSVSNSSASQEKHSGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.30|      13|      27|     444|     456|       6
---------------------------------------------------------------------------
  444-  456 (25.75/17.14)	MNLGQGDF..RYRRY
  472-  486 (20.55/12.14)	LKIGEGGYgpVYKCY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP12291 with Med32 domain of Kingdom Viridiplantae
Unable to open file!