<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12275
Description |
mediator of RNA polymerase II transcription subunit 33A-like isoform X1 |
Sequence | MDIMVVQHFLQILFFIFIMLLLSEQRMNFALAAGNLYHLIVEACIARNLLDTSAYFWPGYVNGRMNQLPHSMPTQVPGWSSFMKGAPLTQAMINALVSAPASSLAEMEKIFEMAVKGADDEKIAAATILCGASLIHGWNIQEHTVNFITRLLSPPVPTDYSGKDSHLIGYAPTLNVLLVGIAPVDCVQIFSLHGMVPQLAASLMTICEVFGSCAPNISWTLTTGEDISVHAVFSNAFALLLKLWRFNHPPIEYRVGDVPPVGCQLTPEYLLLMRNSHLVSSGDMLKDPNRRRLAAVASSSSPNPIFVDSFPKLRVWYRQHLACIASTLSGLVNGTLVCQTVDLLLNMMFKKINGGSQSLISITSGSSSSSGTGSEDTSPRPKLPAWDILEAVPFVVDAALTACAHGRLSPRELCTGLKDLADFLPASLATIVSYFSAEVTRGVWKPVFMNGTDWPSPAANLSNVEEQIKKILAATGVDVPSLAAGGSSPAILPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLNNNHAVIQLLKSCFMTTLGLNSSSISSNGGIGALLGHGFGSHFYGGISPVAPGILYLRVYRSIRDIMFLREEIVSLLIQSISDIAHSELPRQRLGKLKKSKNGKKFGNVSLAKTMTRVKLAALLGASLLWLSGGSGLVQSLIKETLPSWFLSVHSSNQGGEGGLVPMLKGYALAYFAVLCGAFASGVDSLSMASKRRPKIIGRHVEFIASVLDGKISLGCDPATWHAYVSGFVSLMVGCTPTWVFEVDAELLKRLSKGLRQWHEEDLALALLSIGGVGTMGSAAELIMEVSS |
Length | 855 |
Position | Tail |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
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Aromaticity | 0.08 |
Grand average of hydropathy | 0.325 |
Instability index | 38.38 |
Isoelectric point | 8.56 |
Molecular weight | 92042.20 |
Publications | PubMed=24807620
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP12275
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 559.31| 189| 270| 38| 263| 1
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38- 263 (276.58/212.85) HLiveACIARNLldtsayfwPGYVNGRM.....NQLPHSMPTQVPGWS....SFMKGAPlTQAMINALVSAPASSLAEMEkIFEmAVKGADDekiaAATILCGASLIHGWNI...QEHTVNFITRLLSPPVpTDYSGKDSHLIgYAPtlnVLLVGIA.PVDCV..........QIFSLHGM.VPQLAAslmticevfGSCAPNI.SWTLTTGEDISVHAVFSNAFALLLKLwrfNHPPIEYRVGDVP.PvgC
320- 534 (282.73/143.88) HL...ACIASTL........SGLVNGTLvcqtvDLLLNMMFKKINGGSqsliSITSGSS.SSSGTGSEDTSPRPKLPAWD.ILE.AVPFVVD....AALTACAHGRLSPRELctgLKDLADFLPASLATIV.SYFSAEVTRGV.WKP...VFMNGTDwPSPAAnlsnveeqikKILAATGVdVPSLAA.........GGSSPAIlPLPLAAFVSLTITYKLDKASQRFLNL...AGPALESLAAGCPwP..C
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 259.55| 83| 130| 562| 645| 2
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562- 645 (137.76/84.35) FLNNNHAVIQ.LLKSCFMT.TLGLNSSSISSNGGIGALLgHGFGSHFYGGI.SPVAPGILYLRVYRSIRDIMFLR..EEIVSLLIQSIS
693- 780 (121.79/69.98) WLSGGSGLVQsLIKETLPSwFLSVHSSNQGGEGGLVPML.KGYALAYFAVLcGAFASGVDSLSMASKRRPKIIGRhvEFIASVLDGKIS
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