<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12268

Description U-box domain-containing protein 32-like isoform X2
SequenceMTHFFPLKIYHKRNRKLWNFREWQLSELKSSKAKFVCQHAPIHCQIWFTCSSYLIHTRSKNCSHLTSKESLSSPKDNGGTKLHDHADDGYEDLNISEDASMSADKMVNVEIKGNYSFLRSKNKCEAHLHRSTSLPILEEGRFHAKPSSDERSRLEHAMMDAENSKKRAFEESVKRWRAEEDAMEAIHMAEVSYKLSKEEEGRRKEKEEILAKQKEEVERMKIQYDLCLKELQMIQEKKLVLESQITESSYAAQELEEKIIQAVELLISFRKKRDELQIECDNAIKEVNQFRKLVEADTDEHCIKNFFSISFSDIIEATQNFDPTSKIGEGKLGSVYKGIIHNVKVAIKMLPACGSLSDSDFQHKAESLSRVRHPNLVTLMGICSESRSLTYEFLEKGNLEDHLAGRTKSRPLCWQHRIRIAVEICSALIFLHASDPCLVHGNLTLSNILLDAKFISKISDLGVHLLVSHNENSSIDGIFCCKDDPEASDPECIDKGQLTVESDVYSFGIILLRLLTARPASGIVREVKCAWESGNLGSVLDCSAGEWPTERANLLAYLALRCCANDPLNRPNMLLDVWPTIEPMRDVSTPCPDSNTSSQGSKGQRRIPPHFVCPIFQVRLRYMISVLLLQILALVS
Length636
PositionTail
OrganismNicotiana tabacum (Common tobacco)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae> Nicotiana.
Aromaticity0.07
Grand average of hydropathy-0.392
Instability index46.69
Isoelectric point6.41
Molecular weight72326.00
Publications
PubMed=24807620

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP12268
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.96|      35|      60|      85|     143|       1
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  107-  142 (57.11/63.49)	VNVEIKGNYSFLRSKNKCEAHLHRSTSlPILEEGRF
  420-  454 (59.85/21.44)	IAVEICSALIFLHASDPCLVHGNLTLS.NILLDAKF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.99|      19|      23|     143|     161|       2
---------------------------------------------------------------------------
  143-  161 (33.86/20.10)	HAKPSSDERSRLEHAMMDA
  167-  185 (33.13/19.52)	RAFEESVKRWRAEEDAMEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.25|      20|      30|     225|     254|       4
---------------------------------------------------------------------------
  225-  247 (24.54/41.26)	DLCLKELQmiQEKKLVlESQITE
  281-  300 (33.71/17.92)	DNAIKEVN..QFRKLV.EADTDE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP12268 with Med32 domain of Kingdom Viridiplantae
Unable to open file!