<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12253
Description |
mediator of RNA polymerase II transcription subunit 19a-like |
Sequence | MDPDSKTFGRGPRELTGAVDLITHFKLLAHHEFFCKKPLSLSISDTHYLHNVVGDTEIRKGEGMQLDQLIQDTSSSKESNSCIQSFDLDVLREAFQLRETAPIDLPPSEKGIPTVAGKSKSESKDKEKKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKEKKKDKTGHHDSGADHSKKHHEKKRKHDGEEDVNNVHKHKRNKHKSSKIDEIGAIRVAG |
Length | 219 |
Position | Head |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -1.442 |
Instability index | 37.62 |
Isoelectric point | 9.42 |
Molecular weight | 25123.91 |
Publications | PubMed=24807620
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
transcription factor binding GO:0008134 IBA:GO_Central
|
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP12253
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.67| 13| 31| 120| 132| 2
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120- 132 (22.99/ 8.04) KSESKDKEKKHKK
154- 166 (21.68/ 7.18) RSKDKDKEKKKDK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.92| 15| 20| 169| 187| 3
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169- 187 (22.15/17.32) HHDSgadhSKKHHEKKRKH
190- 204 (26.77/11.07) EEDV....NNVHKHKRNKH
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