<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12212
Description |
mediator of RNA polymerase II transcription subunit 6-like |
Sequence | MSTTPMMPPMGNPNFDGGAPPQPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSRAIHPLDISHLSKMTGSEYTLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYILDGSIYQAPQLCNVFAGRLGRALYHISKAFSSAASKLEKTGYVASENESATSEPTKPAKEPIDFKELKRVDHILASLQRKLPPVPPPPPFPEGYAPPSTAEASENQQAETQLPTVDPIIDQGPSKRMKV |
Length | 252 |
Position | Head |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.536 |
Instability index | 61.43 |
Isoelectric point | 5.98 |
Molecular weight | 28151.76 |
Publications | PubMed=24807620
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Function
Annotated function |
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
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GO - Biological Function | transcription coactivator activity GO:0003713 IBA:GO_Central
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP12212
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 202.67| 63| 106| 15| 85| 1
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15- 85 (108.39/75.00) FDGGApPQPPQpgtdmtgIC..FRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSR....AIHPLDISHLSK
124- 192 (94.28/49.27) LDGSI.YQAPQ.......LCnvFAGRLGRALYHISKAFSSAASKLEKTGYVASENESATSEptkpAKEPIDFKELKR
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