<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12190
Description |
uncharacterized protein LOC107776212 |
Sequence | MDSADWRTQLLPDSRQRIVNNITETLKRQLSVTREEGVQELKKIAVGFEEKIYTAAISQPDYLQKISLKMLTMETKSHNPMTNLSNAASSGQNAHDPGTARAGAAAGVMDAADWRTQLLPDFRQSIVNKITETLMRHLPVTGEEGVQELKKIALRFEEKIYTAAISQPDYLRKISLKMLTMETDSQNPMTNSANAASSGQNAHDPGTAPAGAAAGDMDAVDWRTQLLPDSRQRIVNKITETLKRHLPVTGEEGVQELKKIALRFEEKIYTAAISQPDYLRKISLKMLTMETKSQHPMTNSINAASSGQNALGPDIDSCQEREITQGSMKRKREDWGDNVEEHNDQILPTFTCEICTEVVPITKKFNNFHSCNHSFCSKCIERHVEVKIQLRIADIQCPYVDCGKLLDPLVCRTMIPLSIFEKWCDLLCKQAHLGFEKCYCPYQDCGELIVKECGDVVGKSECPNCRRLICFQCGLPWNVCEENGCSKVNDTLFKELVEQKQWTKCPSCNMYVERIAGCNHMQCRCNFSFCYKCGKSPTAQRRWCRCK |
Length | 547 |
Position | Tail |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.483 |
Instability index | 40.68 |
Isoelectric point | 7.64 |
Molecular weight | 61747.21 |
Publications | PubMed=24807620
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Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | chromatin DNA binding GO:0031490 IBA:GO_Central
metal ion binding GO:0046872 IEA:UniProtKB-KW
transcription coactivator activity GO:0003713 IEA:InterPro
transferase activity GO:0016740 IEA:UniProtKB-KW
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP12190
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 654.43| 107| 107| 86| 192| 1
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1- 84 (162.97/112.72) ............................MDSADW.......RTQLLPDSRQRIVNNITETLKRQLSVTREEGVQELKKIAVGFEEKIYTAAISQPDYLQKISLKMLTMETKSHNPMTNL
86- 192 (229.34/161.76) NAASSGQNAHDPGT....ARAGAAAGV.MDAADW.......RTQLLPDFRQSIVNKITETLMRHLPVTGEEGVQELKKIALRFEEKIYTAAISQPDYLRKISLKMLTMETDSQNPMTNS
194- 300 (229.61/161.96) NAASSGQNAHDPGT....APAGAAAGD.MDAVDW.......RTQLLPDSRQRIVNKITETLKRHLPVTGEEGVQELKKIALRFEEKIYTAAISQPDYLRKISLKMLTMETKSQHPMTNS
302- 358 (32.52/16.34) NAASSGQNALGPDIdscqEREITQGSMkRKREDWgdnveehNDQILPTFTCEICTEV..............................................................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 189.67| 40| 40| 397| 436| 2
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397- 428 (56.86/40.78) ..................................CPYVDCGKLLDPLV.CRTMIPLSIFEKWCDLLC
429- 470 (67.35/50.05) KQAHLGFE.......................kcyCPYQDCGELIVK.E.CGDVVGKSECPNCRRLIC
471- 530 (42.36/27.97) FQCGLPWNvceengcskvndtlfkelveqkqwtkCP..SCNMYVERIAgCNHMQCRCNF.SFC....
532- 546 (23.10/10.95) ......................................KCGK..SPTA.QR.........RWCR..C
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