<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12189
Description |
mediator of RNA polymerase II transcription subunit 33A-like |
Sequence | MAAMVSSVQIQSNLWDGVMELTKSAQQKGTDPLMWAIQLSSNLNSAGLSMPSTDVANLLVSHICWANNVPIAWKFLEKALTLRVVPPMFVLALLSTRVIPARRSYPVAYRLYMELLKRYAFSLASLINGPNYQKIMEAINDTLHLYQIFGLQGSESGLIMVEFVFAIVWELLDASLDDEGVMELTAEKKSRWPITSQDMELNNHDAFAGGRAEKHEGLCKMNTVMAIEIIGEFFRDKVTSAILYLARKNMPEHWESFTQNLRLLVSNSSALRNSKNISPEALLQLTSNNHVVLSRKRKTSSQKKFHAVVASGSLASSADQCHGASPSVLWLPIDLFLEDTIDGSQVAATSAAETLTGLVKALQAVNSTTWQDTFLGLWIAALRLVNRVRIHDESLPSIVKLSYLSFLSFLYFPLGKIIGKHVTSLQKKQQDLLSSLQQLVDYEGLLTPPLPAAPLANQAAAKAMIFLSGLRVGSGYFEGMSLNDMPVNCAGNLRHLIVEACIARSILDTSAYLWPGYVKGRCDQVPRSVSAQMPGWSSLMKGSPLTPPMVSSLVSTPASSLAEIEKIYDIAVNGSDDDKISAATILCGASLARGWNIQEHTVLFITRLLSPPVPANYSGTESHLIGYARFLNVLLIGVSSIDCVQIFSLHGLVPQLAGALMPICEAFGSCAPNVTWIVMSEEISSHDIFSNAFTLLLKLWRFDQPPRENVMDVVPVGSRLTPEYLLLVRNSQLASSDDLQKDQSKIKRLSRLSSPLSGEPIFMDSFPKLKLWYRQHQACIGSPLSGLLPGTPVHQIVEALLNFMFRKINRTGQSLAPTTSGSSSSSGPGNEDVFLHLKLPAWDILEAVPFVLDAALTACAHGRLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGIWKLASMNGTDWPSPAANLATVEQQIKKILAATGVNVPSLTVGGNSPATLPLPLAALVSLTITYKLDRSTDRFLNLISPALSNLATACPWPCMPVMVALWAQKVKRWSDFLVFSASRTVFHHNSDAVVQLLRMCFAATLGLTTSCIASNGGVGALLGHGFGSHFSGGISPVAPGILYLRIHRAVRNAMFMTEEVVSLLMHFVRDIASSGLPAEKLEKLKKSKYGMRYGQVSLAAAMTRVKLAASLGASLVWITGGVALVQSLIKETLPSWFISAHGSEPSGGMSGGLVAMLGGYALAYFAVLSGTFAWGVDSSSPASQHRSSILGAHLEFLASALDGKISLGCNKATWKAYVSGFVSLMVGSTPGWMLEVDVDVLKRLSMGLKQWNEEELALALLGSSGIGAMGTAAEMIIEGGFNFVR |
Length | 1317 |
Position | Tail |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.223 |
Instability index | 45.10 |
Isoelectric point | 8.28 |
Molecular weight | 142503.58 |
Publications | PubMed=24807620
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12189
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.18| 12| 29| 750| 761| 1
---------------------------------------------------------------------------
750- 761 (22.16/12.27) SRLSSPLSGEPI
782- 793 (23.02/13.09) SPLSGLLPGTPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.58| 19| 29| 248| 266| 2
---------------------------------------------------------------------------
248- 266 (35.31/23.88) KNM.PEHWESFTQNLRLLVS
275- 294 (27.26/16.72) KNIsPEALLQLTSNNHVVLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 126.44| 32| 34| 1174| 1207| 3
---------------------------------------------------------------------------
1142- 1172 (21.00/ 6.77) ..SLGAS..LVWITGGVALvqsliketlpSWF...IS...A..
1176- 1207 (59.62/39.31) EPSGGMSGGLVAMLGGYAL..........AYFA.VLSGTFAWG
1209- 1240 (45.82/22.43) DSSSPASQHRSSILGAH.L..........EFLAsALDGKISLG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.25| 27| 34| 51| 83| 4
---------------------------------------------------------------------------
51- 77 (50.25/36.37) PSTDVANLLVSHICWA.NNVPIAWK.FLE
86- 114 (40.01/17.30) PPMFVLALLSTRVIPArRSYPVAYRlYME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.15| 27| 35| 944| 972| 7
---------------------------------------------------------------------------
944- 972 (38.60/31.54) SPA......TLPLP.LAALVSLtITYKLDRSTDrFL
976- 1009 (45.55/27.35) SPAlsnlatACPWPcMPVMVAL.WAQKVKRWSD.FL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.68| 11| 34| 338| 348| 8
---------------------------------------------------------------------------
338- 348 (18.87/10.02) EDTIDGSQVAA
371- 381 (20.81/11.82) QDTFLGLWIAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 199.05| 50| 367| 489| 538| 9
---------------------------------------------------------------------------
489- 538 (94.91/62.62) CAGNLRHLIVEACIARSILDTSAY.....LWPGYVKGRCDQ.......VPRSVSAQMPGWSS
619- 666 (57.80/35.00) ..GTESHLI...GYAR.FLNV........LLIGVSSIDCVQifslhglVPQLAGALMPICEA
670- 707 (46.33/26.46) CAPNVTWIVMSEEISSHDIFSNAFtlllkLW......RFDQ.......PPR...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.28| 16| 160| 16| 33| 10
---------------------------------------------------------------------------
16- 33 (25.39/23.03) DGVMELTksAQQKGTDPL
179- 194 (30.89/20.74) EGVMELT..AEKKSRWPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.57| 21| 26| 850| 873| 11
---------------------------------------------------------------------------
850- 873 (23.80/28.56) FvLDAALtACAHGRLSPrELATGL
879- 899 (35.76/23.06) F.LPASL.ATIVSYFSA.EVTRGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.26| 20| 246| 1049| 1069| 16
---------------------------------------------------------------------------
1025- 1044 (33.06/15.56) VVQLLRMCFAATLGLTTSCI
1050- 1069 (35.20/22.92) VGALLGHGFGSHFSGGISPV
---------------------------------------------------------------------------
|