<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12159
Description |
U-box domain-containing protein 33-like isoform X1 |
Sequence | MELLTPSPTPLTPSSNSLSGFSSMATYRRGFYRTSQIITPQTREIVEEQNEPKVYIAVGKSVNKNVALVQWACKTFGNSEICIFYVLEPSPYIPTLLGRLPATQANAEVVSAFRDAEREEARKLLSRYLNVCCKSKVKASVAIVEAHFVLKGILDFVNKHNIRKLIIGAIPDFCSLHRSEISSYGSCLLYPSLPFIYSCVKVKKSSQKASFAAAYFPSFCEIFFVYKGKLVWTRQPPDCSSFIGPISANTRAVVADACSLRSRSLTSCKREVILSPERARSSSSRDLLSSGIKSLIFEEGISSDTGLWPKNFSSTSRSNPIIFPSLSISTSPSTGSSCASSAEQMESPDVELESLYKQLEEVCIEFESSRNEAIAEMLKRKKLEAEAVEAMRKVKAFESAHAHEVKLRKEAEVALENILLEKEKLLKEREEKTSELRKAMRNIALLDSRTQEADQRCEEIAGELTLIHSSIATLRQEKRKLLQQNTEAMNWINRWKNRGKDGVLSASGEWSASPALLEFSLSELQTATCNFSESFRIGQGGYADVFKGELADKTVVIKQLHPHNMQQQSQFFEQVEILAKLRHPQLVTLLGVCPEAWCLVYEYIPGRSLQDRLFCKNISPMNWKMRARIISEIASALLFLHSSYPEQIAHGDLRPENMLLDSTDSCKICDTGISSLIPQQTLRCPSFGRQSEPKGLFSYTDPEFHITGALTTKSDIYSFGLIILQILTGRTLAGLLSEVRRAVSCAELESLLDSSAGEWSTYVSRRLAELALQCCEVNSRDRPELTPTLVMELENLHVLEERSVPSFFVCPIRQDIMLDPQIAADGFTYEGEAIQGWLESGHDTSPMTNLKLSHLELTPNHSLRLAIQDWLCNLEFLT |
Length | 878 |
Position | Tail |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.190 |
Instability index | 54.13 |
Isoelectric point | 6.32 |
Molecular weight | 98286.45 |
Publications | PubMed=24807620
|
Function
Annotated function |
Functions as an E3 ubiquitin ligase.
ECO:0000256 ARBA:ARBA00003861
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GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-UniRule
protein kinase activity GO:0004672 IEA:InterPro
ubiquitin-protein transferase activity GO:0004842 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP12159
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.73| 43| 69| 342| 386| 1
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342- 386 (62.14/46.24) AE.QMESPDVELESLYKQLEEVCIEFESSRNEaIAeMLKRKKLEAE
411- 454 (62.59/38.00) AEvALENILLEKEKLLKEREEKTSELRKAMRN.IA.LLDSRTQEAD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.76| 13| 16| 148| 160| 2
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148- 160 (22.68/10.74) FVLKGILDFVNKH
165- 177 (24.08/11.72) LIIGAIPDFCSLH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 107.87| 26| 130| 466| 491| 3
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466- 491 (46.16/27.42) LIHSS....IA..TLRQEKRKLLQQNTEAMNW
599- 623 (44.50/26.19) LVYEY....IP..G.RSLQDRLFCKNISPMNW
639- 664 (17.22/ 6.04) FLHSSypeqIAhgDLRPE..NMLLDSTD....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 132.26| 42| 371| 296| 340| 4
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296- 340 (72.23/49.72) IFEEGISSdtgLWPKN...FSSTSR.SNPI.IF....PSLSISTSPSTGSSCAS
668- 718 (60.03/33.72) ICDTGISS...LIPQQtlrCPSFGRqSEPKgLFsytdPEFHITGALTTKSDIYS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 94.22| 24| 161| 103| 126| 6
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103- 126 (36.87/23.92) TQANAEVVSAFRDAEREEARKLLS
246- 262 (19.33/ 8.89) .......ISANTRAVVADACSLRS
266- 289 (38.03/24.91) TSCKREVILSPERARSSSSRDLLS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.37| 22| 28| 190| 211| 8
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190- 211 (40.21/25.59) YPSLP...FIYSC..VKVKKSSQKASF
216- 242 (36.16/22.27) FPSFCeifFVYKGklVWTRQPPDCSSF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 34.39| 10| 36| 51| 60| 13
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51- 60 (18.46/10.86) EPKVYIA..VGK
88- 99 (15.92/ 8.36) EPSPYIPtlLGR
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