Description | mediator of RNA polymerase II transcription subunit 33A-like |
Sequence | MAAMVSSVQIQSNLWDGVMELTKSAQQKGTDPLMWAIQLSSNLNSAGLSMPSTDVANLLVSHICWANNVPIAWKFLEKALTLRVVPPMFVLALLSTRVIPARRSYPVAYRLYMELLKRYAFSLASLINGPNYQKIMEAINDTLHLYQIFGLQGSESGLIVVEFVFAIVWELLDASLDDEGLMELTAEKKSRWPITSQDMGLNNHDGFAGGRTEKHEGLCKMNTVMAIEIIGEFFRDKVTSAILYLARKNMPGHWESFTQNLRLLVSNSSALRNSKNISPEALLQLTSDNHVVLSRKRKTSSQKKFHAVVVSGSLASSADQCHGASPSVLWLPFDLFLEDTIDGSQVAATSAAETLTGLVKALQAVNSTTWQDTFLGLWIAALRLVNRVRIHDESLPFIVKLNSEIXANLIEEEERNCSSTNQTKESSRKRHQDLLSTLQQLDDYEGLLTPPLPAAPLANQAAAKAMMFLSGLRVGSGYFEGMSLNDMPVNCAGNLRHLIVEACIARNILDTSAYLWPGYVKGRCDQVPRSVSGQMPGWSSLMKGSPLTPPMVSSLVSTPASSLAEIEKIYDIAVNGSDDDKISAATILCGASLARGWNIQEHTVLFITRLLSPPVSANYSGTESHLIGYARFLNVLLIGVSSIDCVQIVSLHGLVPQLAGALMPICEAFGSCAPNVTWIVMSEEISSHAIFSNAFTLLLKLWRFDQPPRENVMDVVPVGSRLTPEYLLLVRNSQLASSDDLQKDQSKIKRLSRLSSPLSGEPIFMDSFPKLKLWYRQHQACIGSPLSGLLPGTPVHQIVEALLNFMFRKINRTGQSLAPTTSGSSSSSGPGNEDVFLHLKLPAWDILEAVPFVLDAALTACAHGRLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGIWKLASMNGTDWPSPAANLATVEQQIKKILAATGVNVPSLTVGGNSPATLPLPLAALVSLTITYKLDRSTDRFLNLMGPALSNLATACPWPCMPVM |
Length | 996 |
Position | Tail |
Organism | Nicotiana tabacum (Common tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae> Nicotiana. |
Aromaticity | 0.07 |
Grand average of hydropathy | 0.099 |
Instability index | 49.45 |
Isoelectric point | 6.46 |
Molecular weight | 108455.92 |
Publications | PubMed=24807620 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro |
Binary Interactions |
Repeats | >MDP12153 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 101.17| 20| 67| 755| 774| 1 --------------------------------------------------------------------------- 682- 702 (30.04/15.82) SEEISSHAIFSNAFTlLLKL..W 755- 774 (40.03/23.44) SSPLSGEPIFMDSFP.KLKL..W 824- 844 (31.10/16.62) SSSSSG.PGNEDVFL.HLKLpaW --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 187.95| 63| 232| 197| 273| 2 --------------------------------------------------------------------------- 197- 266 (94.56/68.84) QDM..GLNNHDGFAGGRTEKHEGLCKMNTVMAIEIIgeFFRD.KVTSAilY...LARKNMPghwESFTQNLRLLVS 432- 500 (93.38/60.66) QDLlsTLQQLDDYEGLLTPPLPAAPLANQAAAKAMM..FLSGlRVGSG..YfegMSLNDMP...VNCAGNLRHLIV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 55.14| 16| 160| 16| 33| 3 --------------------------------------------------------------------------- 16- 33 (24.83/22.07) DGVMELTksAQQKGTDPL 179- 194 (30.31/19.80) EGLMELT..AEKKSRWPI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 184.00| 56| 301| 583| 642| 4 --------------------------------------------------------------------------- 537- 578 (55.44/31.62) ...............G.W.....SSLMKGSPLTPPmVSSLVSTPASSLAEIEKIYDIAVNG.SD 583- 642 (86.81/66.10) SAATILC..GASLARG.WNIqehTVLFITRLLSPP.VSANYSGTESHLIGYARFLNVLLIGvSS 885- 923 (41.75/21.58) SLATIVSyfSAEVTRGiWKL...ASMNGTDWPSP...AANLATVE................... --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KPKNAFFGKNKG 2) SQGRHW | 332 347 | 343 352 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab