<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12083

Description U-box domain-containing protein 35 isoform X2
SequenceMEKILEADANTVSQRSSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHATIKGVPTPSTAFKKEVEWQTNEMLLPFKRLCEQRKVHVDVVLIESDDVAIAIAEEVAKGAITKLVVGASSRGIFKSKQKGISMKISVSTPRFCTVYAISKGKLSIRQSDMPIDGNIVDDASETSLSSSSSSNYTSTSQTESASVSSYAGLHSSSLATQRFQALSSINSALLSTNPSLSDTSHSRGQSLDLGRENTATSSARNSDIDHALSRVSSCKSFISDTESWMYDQNSIKDVPLAATLPSPNRQAKLNLELEKLRIELRHVQGLHAVAQSEKIEASRKLNDLSKRRSEETIKMKEIIAKEEKAKEFAKLEIEKYQDASREAVYMKECAEREAVERKETELKVIRATKEKEKLEDALSGNILQYRKFTWAEIVSATSSFSEDLRIGMGAYGTVYKCILYHTTVAVKVLNTNGNRESKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRKNNTCPITWFERFRIAWEIASALAFLHSSKPEPIIHRDLKPANILLGRNLVSKIGDIGLSTVLHSDNLSTMYKDTAPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVETAIEGGNLTDILDPEAGAWPFKETLDLALLGLSCAELRRRDRPDLKDQVLPILDRLKEVADRAQNSASTVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIDKWLEENDNSPMTNIALPHKHLIPNYTLLSAILEWKSAES
Length793
PositionTail
OrganismVigna radiata var. radiata (Mung bean) (Phaseolus aureus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.06
Grand average of hydropathy-0.299
Instability index43.84
Isoelectric point7.26
Molecular weight88129.66
Publications
PubMed=25384727

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP12083
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.61|      22|      28|     311|     333|       1
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  311-  333 (31.64/31.83)	ELEKLRIElRHVQGLHAVAQSEK
  342-  363 (33.97/27.96)	DLSKRRSE.ETIKMKEIIAKEEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     160.09|      44|      59|     101|     144|       2
---------------------------------------------------------------------------
   36-   82 (40.79/23.54)	.....VQW..ALNKFVPEGMIIfKLIhVHATIKGVptpstaFKKEVEWQTNEML
  101-  144 (67.56/43.65)	IESDDVAI..AIAEEVAKGAIT.KLV.VGASSRGI......FKSKQKGISMKIS
  163-  203 (51.73/31.76)	IRQSDMPIdgNIVDDASE...T.SL...SSSSSSN......YTSTSQTESASVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.33|      21|      26|     225|     245|       3
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  225-  245 (35.41/22.45)	NSALLSTNPSLSDTSHSRGQS
  252-  272 (32.92/20.35)	NTATSSARNSDIDHALSRVSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.64|      12|      27|     396|     407|       4
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  396-  407 (19.24/13.03)	RKETELKVIRAT
  425-  436 (21.40/15.30)	RKFTWAEIVSAT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.11|      36|     135|     494|     529|       5
---------------------------------------------------------------------------
  494-  529 (67.41/45.65)	LLLLLGACPDHGCL..VYEYMENGNLEDRLLRKNNTCP
  630-  667 (56.70/37.29)	ILQLLTAKPAIALAhkVETAIEGGNLTDILDPEAGAWP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.38|      22|     315|     278|     304|       6
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  278-  304 (37.06/34.65)	SDTESWMYdqnsiKDVPLAATL....PSPNR
  588-  613 (36.32/22.13)	SDNLSTMY.....KDTAPVGTLcyidPEYQR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP12083 with Med32 domain of Kingdom Viridiplantae
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