<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12077

Description U-box domain-containing protein 52
SequenceMWLPKHRSDKKDGVSGLVAVAIDKKKESQSALKWAVDNLLTRSATVILIHVKLLAPTLSPSPSLFAPRISSFLGDDTSVVSKEHEGQNRSVFLPYRVFCTRKDIQCKDVLLEDSEVPRAIIEYASQTGVEHLVLGSSAKTSFLKRFKVSDIPGEIAKGAPDFCTVYVIAKGKIQTMRSATRPAPAIFSNQLCQVNNGRSNLSEPNVYSARSIREQETYSFDAGSQYDETFRSPFTRKRYNGRQYGDTPNLDTDISFVSSGRRSTERLIPSLNLDTGISNSRLSYSSDTDANFSFESASYRRKSTEMGSPLELSSFSFESDKQSSCSSQTADELEAEMRRLKLELKQTMKMYNTACKEALTAQQKAVELQRWKIEEERRLEEARLAEEAALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLSAEMKALKESEEKRKVLESLVNVDVRYRKYTIEEIEEATNFFSESLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPHMVLLLGACPEYGCLVYEYMANGSLEDRLFRQGNTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYHMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLTHHVARAIEKGTLSEMLDPSLSDWPQEEALNFAKLGVQCAELRRRDRPDLGKVVLPELNRLRNLGEDTDLISALGNPTNMPRDRHVSAVLEGDCPPFPNAVSGEIRANNSVTF
Length782
PositionTail
OrganismVigna radiata var. radiata (Mung bean) (Phaseolus aureus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.07
Grand average of hydropathy-0.401
Instability index50.01
Isoelectric point7.19
Molecular weight87340.35
Publications
PubMed=25384727

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP12077
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     143.50|      44|      48|     335|     381|       1
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  335-  380 (68.71/55.24)	AEMRRLKLELKQTMKmyNTACKEALTAQQKAVE........LQRWKIEEERRLE
  385-  423 (56.96/37.67)	AEEAALAIAEKEKAK..SKAAIEAAEAQKRIAE........L.....EAQKRLS
  424-  456 (17.83/ 6.99)	...........AEMK....ALKES.EEKRKVLEslvnvdvrYRKYTIEE.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.47|      14|      20|     241|     258|       3
---------------------------------------------------------------------------
  249-  264 (15.71/11.98)	NLdTDISFVSsGRRST
  311-  324 (22.76/ 7.30)	EL.SSFSFES.DKQSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.91|      27|     235|     515|     541|       4
---------------------------------------------------------------------------
  515-  541 (54.95/31.85)	RHPHM.VLLLGACPEYGCLVY.EYMANGS
  751-  779 (40.96/22.16)	RDRHVsAVLEGDCPPFPNAVSgEIRANNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.03|      46|     657|      13|      81|       5
---------------------------------------------------------------------------
   13-   81 (65.44/86.60)	GVSGLVAVAIDKKKESQsalkwavdnlltrsatvilihvkLLAPTLSPSPSLFA..........................PRISSF..LGDDTSVVS
  668-  741 (63.59/42.50)	GLTHHVARAIEKGTLSE.......................MLDPSLSDWPQEEAlnfaklgvqcaelrrrdrpdlgkvvlPELNRLrnLGEDTDLIS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP12077 with Med32 domain of Kingdom Viridiplantae
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