<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12071
Description |
mediator of RNA polymerase II transcription subunit 12 isoform X2 |
Sequence | MRQPLLTPYKLKCDKEPLNSRLGPPDFHPQTPNCPEETLTREYLQSGYRDTVEGLEESREISLTQVPNFNKGVVLNCKEAIRKRLRAINESRVQKRKAGQVYGVALSGSQLAKPGVFPEQRPCPEDFKRKWIEGLSQQHKRLRSLVDLVPHVRRKSLLEVLIRNNVPLLRATWFIKVTYLNVVRPGSASILSGIGDKTQQTCSELWTKDVVEYLQTLLDEFFSKNSSHFTHNRDRSPQLPYTASLQHRSDQLSVSDGEEPSLHFKWWYIVRLLQWHHTEGLLIPSLIIDWVLRQLQEKQSLEIWQLLLPIVYGFLEIVVLSQTYVRTLAGVALRVIRDPAPGGSDLVDNSRRAYTTSALIEMLRFLILAAPETFVALDCFPLPSSVVSYAINEGSFILKATEAAGKIKSSSEDVCLFKSKGFDAQYQSLAFDHVISCIQERVQDLTKAVKPGYPGQYLAKAAQALDKSLVLGDLHGAYKFLFEDLCDETVSEGWVAKVSHCLRLSLKWFRTVNTSFIYSVFFLCEWATCDFRDFRTAPCDVKFTGRKDLSQVHIAIRLLKMKLRDMQISTRQKSGNTRGHGFSYLGKCSGHQSNRNFVKNASRTKSSSRSMDQNICSSAIFESPGPLHDIIVCWIDQHMVHKGEGLKRVHLLVVELIQAGIFYPLAYVRQLIVSGIMDMNVVDLERQKRHCRILKQLPKKFVRDALVESGISEGPQLTEALQIYLNERRLILRCSLWENHGNGSNVSISSLKQKQCMSSTKDKASTVSIDQLKSAPSNKASSKSGKDGSGVEDLKTFISALLQLPKSLSNLGSTGLDESQSSVRKPIGSRNKIDLLETTPGCEECRKAKRQKLSEERSLFVQAPSPVLSDDEDTWWAKKGLKSSEPLKVDQPLKPIKQVTKTRQKTVRKTQSLAQLAASRIEGSQGASTSHMCDNKVSCPHHRTAMNGDTARSVDGIQLSECEDIVSIGKALKRLRFVERKEITLWLMSVIRELIEESEKVVGKVSQFGRPFATVDDKSSIRWKLGEDDLSALLYLMDVSDDLVSAVKFLLWLLPKVYSSPNSTIHSGRNVLMLPRNMENQACDVSEAFLLSSLRRYENILAAADLIPETLSSVMQRVAAIMASNGRVSGSGALAFARYLLKKYGNVVSVSEWEKNFKSTCDKRLAFEIESGRSVDGELGLPLGVPAGVEDPDDYFRQKISGGRLPSRVGSGMRDVVQRNVEEAFQYLFGKDRKLFAAGAPKGPAFEKWDNGYQNAQQIVAGLIDCIRQTGGAAQEGDSSLVTSAVSAIVGSVGPTLAKLPDFSAGSNQSNMSLATSSLNYAKCILRMHITCLCLLKEALGERQSRVFEIALAMEASTALAGVFAPSKASRAQFQMSPETHDAGTIPSDVSNNSSKIVVARTTKISAAVSALVVGAIIAGVVSLERIVTILRLKDGLDVVQFVRSTRSNSNGSVRSVGAFKVDCSVEVHVHWFRLLVGNCRTICEGLVVDLLDEPSIVALSRMQRMLSLSLVFPPAYSIFSFVMWRPFVMNANIAFREDMNQLYQSLTMAISDAIKHLPFRNVCLRDCQGLYDLMAANMTDAEFATLLELNGSDIHSKSLAFIPLRARHFLNALIECKMPQSIYTKEEGSRNSGHGESKIDFTDSESTLQDKLVDVLDALQPAKFHWQWVELRLLLNEQALIEKMKMHDISLADAIQLSSPSLEKSGASENENNFIEIILTRLLVRPDAAPLFSEVVHLFGKSLEDSMLLQAKWFLAGQDVLFGRKTIRQRLINIAESKRFSIKTQFSEPWGWCTPCKDPVTLKGDKKKVDSMPLEEGEVVEEGMDVKRSIKGFSPVFDSERSTSKQQHGTERALLELILPCIDQSSDESRNSFASDLIKQLNYIEQQIAVVTRGPTKPVNTPATEGQTNKVNSRKNIRSGSPGLARRPTPTPDSSSLSPAALRASISLRVQLLMRFLPIICTDGESSVRSMRYTLASVLLRLLGSRVVHEDAIVNAMQYSPLRKEAESPAEAAFVDSSVECLFDRMLLILHGLLSSSLPSWLRSKPVVKTSNESAREFSGFDREPLEALQNQLDNMQLPDTIRWRIQAAMPVLPFTIRCHFSCQLPTVPTSALASLQPNTTNSGFNSSSSTVPQRNPVPSSRTTASGKSKQQENDLDIDPWMLLEDGAGSCPSANNTNIIGSGDRVNIRAASWLKGAVRVRRTDLTYVGAVDEDS |
Length | 2216 |
Position | Kinase |
Organism | Vigna radiata var. radiata (Mung bean) (Phaseolus aureus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.220 |
Instability index | 50.65 |
Isoelectric point | 8.84 |
Molecular weight | 246337.64 |
Publications | PubMed=25384727
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12071
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 323.48| 107| 375| 399| 512| 1
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399- 512 (168.68/126.48) KATEAAGKIKSSSEDVCLFKSKGFD.....AQYQSLAFDHVISCIQERVQDLTKA.VKPGYPGQYLAKAA..QALDKSLVLgdLHGAYKFLFEDlcDEtvsEGWVA....KVSHCLRLS..LKWFRTV
779- 899 (154.80/97.46) KASSKSGKDGSGVEDLKTFISALLQlpkslSNLGSTGLDESQSSVRKPIGSRNKIdLLETTPGCEECRKAkrQKLSEERSL..FVQAPSPVLSD..DE...DTWWAkkglKSSEPLKVDqpLKPIKQV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 177.41| 61| 379| 1612| 1680| 2
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1612- 1680 (86.78/94.89) NALIEcKMPQSIYTKEEGSrnsghgESKIDFTDSE.STLQDKLVDVLDALQPAKFHwQWVELRLLL...NEQA
1992- 2056 (90.62/68.61) DAIVN.AMQYSPLRKEAES......PAEAAFVDSSvECLFDRMLLILHGLLSSSLP.SWLRSKPVVktsNESA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.25| 28| 218| 928| 956| 8
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928- 956 (49.82/39.03) STSHMCDN.KVSCpHHRTAMNGDTARSVDG
1149- 1177 (46.44/30.36) SVSEWEKNfKSTC.DKRLAFEIESGRSVDG
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