<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12046
Description |
mediator of RNA polymerase II transcription subunit 23 isoform X2 |
Sequence | MAISMETQLQSIFEDVVKTEVIEEAFAGMFMDTPEDERTKLISCLGAFRQYWSTLPPDSHDQCVQWIVRFIHGQHSPKRISFLYDCLAMAVETSLLPPRMVCQALISSDNLEWERTQLWALTFRLIRKIIGGVDYKGVRDLLKALLDKIQTIPNTVSSAVVQQLLAAREVVEYILDRNACLLPAYFAITEIRKLYPEGMLSHWLLGSLMSDFVDSFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPTTLRFPLRGMLPFDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNIAQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDISKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLGMTDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRITLPGTNCTASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNPPMQQQSHYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRAPGWCLSETYIKCGMNPREDNVWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLSVVLKSQPLVPRENITAWMNAIGLVITALPEPYWVVLQDRIVSVLGSPCFTTETEWVGYPFALLDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPIVKTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHSQHLSYMDPICDFLYHIKYMFTGDSVKDQVEKIILTLRPAMKLRLRFITHTSKMEPAAASVPQPSSSVSSPAPQSNPGPSNLPLSVAQ |
Length | 1382 |
Position | Tail |
Organism | Salmo salar (Atlantic salmon) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Protacanthopterygii> Salmoniformes>
Salmonidae> Salmoninae> Salmo.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.021 |
Instability index | 45.50 |
Isoelectric point | 7.09 |
Molecular weight | 157746.39 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP12046
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.24| 25| 31| 478| 507| 1
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478- 502 (45.78/32.41) GMTDYKIALLCNAYSTNSECFTLPM
511- 535 (45.46/21.70) GNGSMRITLPGTNCTASGSVTPLPM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 405.57| 137| 616| 211| 389| 2
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211- 371 (196.85/166.34) DF.VDSFRPTARINSIcGRCslLPVVNNsgaicNSWKLDPTTL.RFPL.RGMLPFDKDlfEPQTG..LLRYVLEQPYS.RDMVCNMLglnKQtlNIAQHkqrcpVLE.DQLVDLVVYamERSETEEQFDDGGTSQL...LWQHLSSQLIFF..VLFQFasFPHMVLSLHQKLA
838- 986 (208.72/115.59) DFlVYEFSTSAGGQQL.NKC..IEILND.....MVWKYNIVTLdRLILcLAMRSHEGN..EAQVCyfIIQLLLLKPNDfRNRVSDFV...KE..NAPEH.....WLQsDWHTKHMTY..HKKYPEKLYFEGLAEQVnppMQQQSHYLPIYFgnVCLRF..LPVFDIVIHRFLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.78| 15| 15| 1005| 1019| 3
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1005- 1019 (28.96/16.91) YKFHDRPVTYLYNTL
1022- 1036 (24.82/13.53) YERHLRDRTNLKRKL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 151.53| 50| 697| 33| 93| 4
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33- 93 (77.49/72.96) TPEDERTKLISCLGA.....FRQywSTLPPDSH.....................DqcvqwIVRFIHGQHSPKrisfLYDCL..AMAVET
733- 810 (74.04/42.16) TPHNWASHTLSCFPAplqafFKQ..NNVPQESRfnlkknveeeyrkwksmtnenD.....IITHFSMQGSPP....LFLCLlwKMLLET
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.68| 14| 18| 1052| 1066| 5
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1052- 1066 (26.19/19.52) WCLSETYIkCGMNPR
1071- 1084 (29.48/17.30) WIPDDTYY.CKLIGR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 65.84| 18| 18| 1192| 1209| 6
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1192- 1209 (35.55/22.44) E.WVGYPFALLDFTACHQS
1212- 1230 (30.29/17.95) EmYCSYVLALAHAVWHHSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.47| 24| 620| 632| 682| 8
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644- 671 (36.81/68.60) PQTNQNQLHL.CVESTALrlitALGSSEV
1108- 1132 (39.66/10.27) PNPAAHALHVtCVELMAL....AVPGKDV
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